Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4565g00024 ATGCGTCGGTGGCTTTGTTGTTCTTGTCATGTTGAAGAGCCTTACCCTTCTGAAAACGAGCACCTTAAAAGCCCAAGGAATTATGGAGATGGTAACCCAAAAGGTTCAAAGGCTTCAGCTCCTGTTAAAGCTGAAACACAAAAGGCTGCACCACCTATTGAAGTGCCAGCATTAGCTTTAGATGAACTGAAAGAAATGACTGACAACTTTGGATCGAAGGCATTGATTGGTGAAGGATCTTATGGGAGAGTATATTATGCAACTTTAAATAATGGAAAGGCTGTTGCTGTGAAGAAGCTTGATGTTTCTTCGGAACCTGAATCCAATGTTGAGTTTTTGACCCAGGTTTCTACCGTCTCAAGAATGAAGCACGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTCGCATATGAGTTTGCAACCATGGGCTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAGCCAGGACCAACCCTTGACTGGATGCAACGAGTTCGAATTGCAGTTGATGCAGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAGCCGCCTATCATACACAGAGATATCCGATCAAGCAATGTACTAATTTTTGATGATTACAAAGCAAAGATAGCTGATTTTAATCTTTCAAATCAGGCCCCTGACATGGCTGCGCGTCTTCATTCCACTCGAGTTTTGGGAACTTTTGGCTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTCCTTACAGGGAGAAAACCTGTTGACCATACCATGCCTCGAGGACAGCAGAGTCTGGTTACATGGGCTACTCCGAGATTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCCAAAGGAGTCGCAAAGCTGGCGGCTGTTGCAGCACTTTGTGTGCAGTACGAAGCCGAGTTTAGGCCAAACATGAGCATCGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTGCTCAAGCACCGGAAACTTGA 1089 0.4463 MRRWLCCSCHVEEPYPSENEHLKSPRNYGDGNPKGSKASAPVKAETQKAAPPIEVPALALDELKEMTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNVEFLTQVSTVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFDDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPAQAPET 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4565g00024 362 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Pral4565g00024 362 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Pral4565g00024 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 198 210 IPR008266 GO:0004672|GO:0006468
Pral4565g00024 362 MobiDBLite consensus disorder prediction 16 49 - -
Pral4565g00024 362 FunFam PTI1-like tyrosine-protein kinase 3 148 357 - -
Pral4565g00024 362 CDD STKc_IRAK 76 351 - -
Pral4565g00024 362 Pfam Protein tyrosine and serine/threonine kinase 75 348 IPR001245 GO:0004672|GO:0006468
Pral4565g00024 362 Gene3D Transferase(Phosphotransferase) domain 1 148 359 - -
Pral4565g00024 362 FunFam PTI1-like tyrosine-protein kinase 3 33 146 - -
Pral4565g00024 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 356 - -
Pral4565g00024 362 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4565g00024 362 SMART tyrkin_6 70 348 IPR020635 GO:0004713|GO:0006468
Pral4565g00024 362 SUPERFAMILY Protein kinase-like (PK-like) 52 348 IPR011009 -
Pral4565g00024 362 PIRSF ILK 29 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4565g00024 Pral-Chr4565 122307 126810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4565g00024 5 349 Receptor kinase-like Gene Family AT4G02010 45.690 1.26e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pral4565g00024 PK_Tyr_Ser-Thr 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4565g00024 K13436 - gmx:100790016 655.21