Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4565g00008 ATGGCTTCTTCTCTGAATTTCCTTCTCCTCTGTTTTCTGCCTTCCCTTTGTGTTTTTGCCCAAACCCGAAGAAGTAACATCACTGTGGGTGATTCTTTCAACGCAGATGGCAATTCCTCATGGGTGGTTTCACCTTCTGGGGATTTCGCCTTTGGCTTTCAACCCCATAAAAATAATAGTTTCTTCTTGCTCTCCATCTGGTATGCCAACATTCCAAACATAACCGTTGTTTGGTATGCAAATGGAGACAATCCTGCTCCAAAGGGGTCAAGAGTTCAGCTTACTGCAGCAGAAGGGCTTAAGATTACTTCTCCTGATGGTCAAACTCTATGGACACCAGAAGTGAGCCCTTCAGGTGCCGTTGCTCATGGTGCCTTGAATGACTTGGGCAACTTTGTTCTTCAGGATGGCAGCTTTAAGTCTGTCTGGGAGACCTTTGGGAATCCCAGAGACACCATGTTGCCCTCACAAATTTTGGAGAAGGGAGAAAAGCTTTCTTCTCGGAAGTCAGATGCGGATTTCGCACGGGGAAAGTTTCGACTTGTTCTTCAGGATGATGGTAATCTTGTCATGCATTCTGTAAACTTACCATCTGGGTACGCTAATGAAGACTATTACGACACTGGTACTGTTGAGTCCAATGCCTCAAGTGCTGGAATTCAACTGGTCTTCAACAAAACGGGAGACTTTTATGTTAGAATGAAGAACAATGGTACGTACCCCTTCTCAGACCAGAGCATAGGCTCTCCAACTCAATTTTATCTTCGAGCTACTCTTAACTTTGATGGAGTTCTCACTTTCTATCAACATCCCAAGAGGTCCACTGGTAATGAAACTTGGACACCTGTCTGGTCTCAGCCAGATAACATTTGTAAGCGTCAGCGGGTCAGTGAAGGAACAAGCATTTGCGGGTATAATGGCTATTGCACATTGGGTGAAAATAGTAGGCCACAGTGTCAATGCCCACCACGTTATTCCCTACTGGATCCTCTTGATCCATATGGTGGTTGTAAACCAGATTTCGTCCAGGGCTGTAAAGAAGATGAGCTTAGTCAGAGGAAAGATCTGTATGAGTTTGAAGTGTTGACAGATGTAGATTGGCCTCTCTCTGACTATGTGCTTCAAAGGCCTTTTACAGAAGATCAGTGCAGAAGTGCCTGCATGGAAGATTGCTTCTGTGCCGTTGCCATTTTCAGATCAGGTGACAGTTGCTGGAAGAAGAGGTGGCCACTTTCAAATGGCCAATACGACACGGGTCTTAATGGTGCTAAGGCCTTGATCAAGGTCAGGAAAGACAATTCCTCCTTAATTGGTCCTCCTGGTCCTCCAATCATCAAAGGAAAGAATCAGGACACTTTGGTTTTGGTGAGCTCTGTCCTCTTAGGTAGCTCTGCCTTTCTTAATCTCGTATTAATTGGAGCATGCTGTCTAGGTTTTTCCTTCATTTATAAATTGCAGAAGAAGCGTACAAGTGTTTGCCGAAGTGACAGTGCTGTTGAAACCAATTTGCGTTGTTTTACTTATAAGGAACTTGAAGAGGCTACAAATGGATTTAAGGAAGAGTTAGGAAGAGGAGCTTTTGGTGTTGTTTATAAAGGAATCATAGAAATGGGCACTGCAGTAACTGTGGCAGTCAAAAGGTTGAACACCTTTCTTGTGCAAGAAACTGAGAAGGAATTCAAGAATGAAGTTAATGTCATTGGCCAGACCCATCACAAGAATTTGGTTCGTTTGCTTGGGTTCTGTGAGGAGGGGACAGAAAGGCTGCTGGTGTATGAGTATATGAGCAATGGCACATTAGCAAACCTTCTTTACGGCGACCCAAAACCCAACTGGAACCTACGCCTAAAAATGGCTTTTGGGATTGCAAGAGGACTTGTTTATTTACATGAAGATTGCAGCACCCAGATCATCCACTGTGATATAAAGCCTCAAAACATACTCCTTGATGACTACTTTAATGCTCGTATCTCTGACTTTGGATTGGTCAAGCTCTTAAATATGAATCAGAGCCGAACCAATACAGGTATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAGCATGCCTGTCACGGCCAAGGTAGATGTCTATAGCTTTGGAGTCCTGTTGCTGGAAATTATCTGTTGCAGAAGAAGCGTGGACATGGAACCAGAGAATGAGGAGAGAGCAATCTTAGCAGATTGGGCTTGTGACTGTTACACGGCAGGTTCTCTAGAAGATTTGGTTGAAGAAGATCAAGAGGCACTGCAAGACAAGAAGAACCTAGTAAAGTTAGTAATGATTGCCATTTGGTGTATTCAAGAGGACCCAACTCTCAGACCCACCATGAGGAAAGTTTCTCAGATGCTTGAAGGAGTTTCTGAAGTGCCTGCTCCACCATGCCAGATCCCAAATAGTGAAACTCTTGGTCACTATCATTCACTCACTTTGGAGGATTGA 2451 0.4398 MASSLNFLLLCFLPSLCVFAQTRRSNITVGDSFNADGNSSWVVSPSGDFAFGFQPHKNNSFFLLSIWYANIPNITVVWYANGDNPAPKGSRVQLTAAEGLKITSPDGQTLWTPEVSPSGAVAHGALNDLGNFVLQDGSFKSVWETFGNPRDTMLPSQILEKGEKLSSRKSDADFARGKFRLVLQDDGNLVMHSVNLPSGYANEDYYDTGTVESNASSAGIQLVFNKTGDFYVRMKNNGTYPFSDQSIGSPTQFYLRATLNFDGVLTFYQHPKRSTGNETWTPVWSQPDNICKRQRVSEGTSICGYNGYCTLGENSRPQCQCPPRYSLLDPLDPYGGCKPDFVQGCKEDELSQRKDLYEFEVLTDVDWPLSDYVLQRPFTEDQCRSACMEDCFCAVAIFRSGDSCWKKRWPLSNGQYDTGLNGAKALIKVRKDNSSLIGPPGPPIIKGKNQDTLVLVSSVLLGSSAFLNLVLIGACCLGFSFIYKLQKKRTSVCRSDSAVETNLRCFTYKELEEATNGFKEELGRGAFGVVYKGIIEMGTAVTVAVKRLNTFLVQETEKEFKNEVNVIGQTHHKNLVRLLGFCEEGTERLLVYEYMSNGTLANLLYGDPKPNWNLRLKMAFGIARGLVYLHEDCSTQIIHCDIKPQNILLDDYFNARISDFGLVKLLNMNQSRTNTGIRGTKGYVALEWFKSMPVTAKVDVYSFGVLLLEIICCRRSVDMEPENEERAILADWACDCYTAGSLEDLVEEDQEALQDKKNLVKLVMIAIWCIQEDPTLRPTMRKVSQMLEGVSEVPAPPCQIPNSETLGHYHSLTLED 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4565g00008 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 210 IPR036426 -
Pral4565g00008 816 SMART serkin_6 516 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4565g00008 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 795 - -
Pral4565g00008 816 CDD STKc_IRAK 522 789 - -
Pral4565g00008 816 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Pral4565g00008 816 PIRSF SRK 1 812 IPR024171 GO:0004674
Pral4565g00008 816 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Pral4565g00008 816 Gene3D - 19 148 IPR036426 -
Pral4565g00008 816 ProSiteProfiles Protein kinase domain profile. 516 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4565g00008 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 268 IPR036426 -
Pral4565g00008 816 FunFam Serine/threonine-protein kinase 150 294 - -
Pral4565g00008 816 FunFam S-receptor-like serine/threonine-protein kinase 485 594 - -
Pral4565g00008 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 21 147 - -
Pral4565g00008 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 798 - -
Pral4565g00008 816 ProSitePatterns Protein kinases ATP-binding region signature. 522 546 IPR017441 GO:0005524
Pral4565g00008 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pral4565g00008 816 SUPERFAMILY Protein kinase-like (PK-like) 499 788 IPR011009 -
Pral4565g00008 816 Gene3D - 149 301 - -
Pral4565g00008 816 Gene3D Transferase(Phosphotransferase) domain 1 595 795 - -
Pral4565g00008 816 SMART blect_4 33 149 IPR001480 -
Pral4565g00008 816 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Pral4565g00008 816 Pfam D-mannose binding lectin 75 160 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4565g00008 Pral-Chr4565 40955 43893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4565g00008 502 789 Receptor kinase-like Gene Family AT1G60800 43.197 2.86e-73 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4565g00008 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4565g00008 - - gmx:100815462 1031.94