Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4563g00007 ATGAAGAGGACAAGTTTCTCTAACGCTTATTTCTGGCTTATCAATATGTTTATGCTGTGTTTGGCAGTGAAGTCCCAACTGACAACTGATTTTTACGCATCATCTTGTCCAAACCTTTTGAAAATCGTTAGGAAAGAGGTTAGAAATGCTCTCATGAATGAGATCAGAATGGGGGCATCATTGCTTCGTCTTCACTTCCATGATTGCTTTGTGAACGGTTGTGATGGATCAGTACTACTAGATGGAGGTAGTGGTAGTGAGAAGTCTGCTCTTCCAAATGCGAATTCTCTCAGGGGATTTGATGTTATAGACACAATCAAATCTTCAGTGGAAAGTGCATGCAATGGCACTGTTTCCTGTGCTGATATATTAGCCATCGCTGCTAGAGATTCTGTCGTCCTTAGTGGTGGCCCCTTTTGGAAAGTTTTACTTGGACGGAGAGATGGATCAATCTCTAATGGGACATTGGCTAATTCAGCTATTCCTTCTCCCTTTGATTCCTTATATTATCATTTCCAAGTCACTAACGCAGGCCTCAATCTGCTCTCTGATGTTGTTTCTTTATCAGGTGCTCATACCTTTGGGAGAGCAAGGTGTGCATTGTTCAGCAATAGATTGTTCAACTTCTCAGGAACAGGAGTACCAGACAGTACACTGGACACAGACATGCTCTCAGATCTTCAGAAGTTGTGTCCTCAAAATGGAGATGGAAACACAACCAGTGTTTTTGATAGGAACTCACAGGATCTATTTGACAACCATTATTTTCAGAATTTGATGAGTGGAAAGGGCCTCCTTAGTTCTGATCAAATTCTATTCTCAAGTGATGCAGCCAATTCAACAACCAAACCTTTGGTTCAGACTTACAGTAACAACGCTTCACTTTTCTTTCAAGACTTTGTGAATTCCATGATTAGAATGGGCAATATCAATCCAAAAACTGGCTCTAATGGAGAGATTAGGAAGAATTGTAGGGTCACAAACTCATAG 990 0.4081 MKRTSFSNAYFWLINMFMLCLAVKSQLTTDFYASSCPNLLKIVRKEVRNALMNEIRMGASLLRLHFHDCFVNGCDGSVLLDGGSGSEKSALPNANSLRGFDVIDTIKSSVESACNGTVSCADILAIAARDSVVLSGGPFWKVLLGRRDGSISNGTLANSAIPSPFDSLXYYHFQVTNAGLNLLSDVVSLSGAHTFGRARCALFSNRLFNFSGTGVPDSTLDTDMLSDLQKLCPQNGDGNTTSVFDRNSQDLFDNHYFQNLMSGKGLLSSDQILFSSDAANSTTKPLVQTYSNNASLFFQDFVNSMIRMGNINPKTGSNGEIRKNCRVTNS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4563g00007 330 FunFam Peroxidase 162 308 - -
Pral4563g00007 330 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PANTHER PEROXIDASE 72-RELATED 17 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Pral4563g00007 330 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 FunFam Peroxidase 30 164 - -
Pral4563g00007 330 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Pral4563g00007 330 Gene3D - 31 329 - -
Pral4563g00007 330 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Pral4563g00007 330 Pfam Peroxidase 43 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4563g00007 330 Gene3D Peroxidase, domain 2 162 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4563g00007 Pral-Chr4563 42769 44466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4563g00007 16 329 Peroxidase AT5G19890 62.739 3.05e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4563g00007 K00430 - gmx:100787073 499.204