Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4563g00002 ATGCACCTCAAGCATCTCTGCGTCATTTTACCTGCAGATTCCGCTGAGTTTAAGCATCACCCACCATCAAAAGTCAACCGATTCTCCCGGAAAGAAACCAAGACAAAGAAACAACAGAGGGCTTGTGGGGGTCAAGTTCTTGCCTTCCTTCGTGATTCTCTGAGCAAATTATATGGCAGAAACTGTTCGAGGTTTTTCCACAATGAAGTGGGGAAAGGGAAACAAGGCTCAGTCGTGCTGTTTCATGACATGGACGGAGTACAACTCTCTGCCAAGATTGGTGGGGACAGCCCACGAATCTTCAGCTTCGCTGAGCTTTTCATAGGGTCTAATGGTTTCAGTGAGGATCATGTTCTGGGAAGTGGAGGATTCGGCAGAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACAGTGGTTGCTGTCAAATGTTGCTTGGCAGAGAAAGGGCAACAATTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCCGTGGCCCATCTTCGTCACAAGAACCTTGTCAGGCTCAGAGGTTGGTGTGTTCATGAAGATCAGTTATACCTTGTCTATGATTACATGCCTAACCTCAGCCTTGACCGCATACTTTTTCGGCGGCCTGAGAATCCAAATGCAGACCCTCTTGGTTGGGGAAGGCGTGGGAAAATTATCAAAGGTTTGGCAGCTGCATTATACTATCTTCATGAGCAACTAGAGACCCAGATCATTCACAGGGATGTGAAAACCAGCAATGTGATGCTTGATTCCCAATATAATGCTCGGTTGGGTGACTTTGGCTTGGCAAGGTGGCTAGAACATGAGCTTGAGTACCATCCAAGTAGGAAAACATCAACCAAGGTTGACCCTTTCAGGTTGGCAGAGACAACAAGAATTGGCGGCACAATCGGGTATCTGCCTCCCGAGAGTTTCCAGAAAAAAAGCATCGCTACTTCGAAATCTGATGTGTTCAGCTTTGGCATAGTTGTGCTGGAAGTGGCATCTGGAAGGAGAGCCATTGATCTTGCATACCCTGATGATAAGATCATTTTACTTGACTTCGTTAGAAGACTATCTGATGAGGGAAAGCTCCTAGCTGCAGGGGATACTCGGCTACCGGATGGTTCCTACAAGCTTGCTGAGATGGAGCATTTTCTTCACATAGGCCTTCTTTGTACGCTCCATGAACCACAATCGAGGCCTAGCATGAAATGGATTGTAGAAGCACTTTGTGACATTTCAAGCCCATTGCCAGCTCTTCCTTCTTTCCATTCCCACCCCTTGTATATTACTTTGTCTTCTCCGTCGGACACAAGTCTCAGCAGCACAAATGCCTCCAGCACTGTCACAGAAAATGTCAGCACAATCACAAACTATTCTTCATCCAACTATGTCACAGCAAGCAAATGGAGAACAATATACATGACTGCTGAAGATAGAAACAGCGGTATCTCCTCTGCAAAGAGCATGTATCGCCACAAATCATTTCCTGTGGTTGAAGCACCAAGGGAAATATCATACAAGGAGCTTGCCTTGGCCACAGATCATTTTTCAGAGTCAAGGAAGGTGGCAGAGCTAGACTTTGGAACTGCCTACTATGGCATCCTTGAGGATCGTTACCATGTCATGGTGAAACGCCTTGGAATGAAGACCTGCCCTGCACTGCGTGAAAGATTCTCCAATGAGCTGCGAAATCTAGCAAGGCTTCGCCACCGGAATTTGGTGCAGCTTCGAGGATGGTGTACTGAGCAAGGGGAAATGCTTGTTGTGTATGATTACTCAGCAACAAGACTTCTCAGTCACCATCTTCTCCATCATGACAATCATAGAGATGGCCGTTCTGTCTTGCAATGGCATCATAGATACGGTATCATAAAATCACTAGCTTCTGCTATTCTTTATCTTCACGAGGAATGGGAAGAACATGTAATTCACAGGAACATCACTTCTTCGGCTGTTGTCCTTGAGCCAGATATGAACCCAAGACTCAGCAGTTTTGCCCTGGCTGAATTTTTGACCCGGAATGAGCATGGCCATCATGTAATCAAAGACACCAGCAAATCAGTTCGAGGGATTTTTGGCTACATGTCACCGGAATATATAGAATCCGGTGAAGCTACCTCAGCCGCCGATGTTTACAGTTTTGGCGTGGTGGTGCTTGAAGTTATCAGTGGACAGATGGCTGTGGACTTTCGGCAGCCTGAGGTGCTATTGGTGAAGAAAGTTCATGAATTTGAAACAAGAAAAAGACCACTGGAGGATTTAGCAGATAGGAGGCTCAACGGAGAGTACAATTACAAAGAACTCATGAGATTGGTAAAGCTCGGAATTGCATGCACCCGATCTGACCCACAGTCAAGACCAAGCATGAGACAAATAGTAAGCATCCTTGATGGAAATGATCGATTGATCATGGAGAAAAACCAGAAAGAGAGCACGGAAGAATGGAAACAGAGGAATGCTTATTCATTGTCATTGATCAGGAGAATCCAAGCTCTAGGCATACGTTGA 2499 0.4586 MHLKHLCVILPADSAEFKHHPPSKVNRFSRKETKTKKQQRACGGQVLAFLRDSLSKLYGRNCSRFFHNEVGKGKQGSVVLFHDMDGVQLSAKIGGDSPRIFSFAELFIGSNGFSEDHVLGSGGFGRVYKAVLPSDGTVVAVKCCLAEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPENPNADPLGWGRRGKIIKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYHPSRKTSTKVDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDEGKLLAAGDTRLPDGSYKLAEMEHFLHIGLLCTLHEPQSRPSMKWIVEALCDISSPLPALPSFHSHPLYITLSSPSDTSLSSTNASSTVTENVSTITNYSSSNYVTASKWRTIYMTAEDRNSGISSAKSMYRHKSFPVVEAPREISYKELALATDHFSESRKVAELDFGTAYYGILEDRYHVMVKRLGMKTCPALRERFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSATRLLSHHLLHHDNHRDGRSVLQWHHRYGIIKSLASAILYLHEEWEEHVIHRNITSSAVVLEPDMNPRLSSFALAEFLTRNEHGHHVIKDTSKSVRGIFGYMSPEYIESGEATSAADVYSFGVVVLEVISGQMAVDFRQPEVLLVKKVHEFETRKRPLEDLADRRLNGEYNYKELMRLVKLGIACTRSDPQSRPSMRQIVSILDGNDRLIMEKNQKESTEEWKQRNAYSLSLIRRIQALGIR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4563g00002 832 SMART serkin_6 513 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4563g00002 832 SMART serkin_6 113 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4563g00002 832 PANTHER - 90 406 - -
Pral4563g00002 832 Pfam Protein tyrosine and serine/threonine kinase 517 793 IPR001245 GO:0004672|GO:0006468
Pral4563g00002 832 Gene3D Phosphorylase Kinase; domain 1 86 190 - -
Pral4563g00002 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pral4563g00002 832 Gene3D Phosphorylase Kinase; domain 1 470 589 - -
Pral4563g00002 832 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Pral4563g00002 832 SUPERFAMILY Protein kinase-like (PK-like) 97 438 IPR011009 -
Pral4563g00002 832 SUPERFAMILY Protein kinase-like (PK-like) 494 794 IPR011009 -
Pral4563g00002 832 FunFam Receptor like protein kinase S.2 591 817 - -
Pral4563g00002 832 ProSiteProfiles Protein kinase domain profile. 113 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4563g00002 832 FunFam Receptor like protein kinase S.2 87 190 - -
Pral4563g00002 832 ProSiteProfiles Protein kinase domain profile. 513 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4563g00002 832 Pfam Protein kinase domain 114 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4563g00002 832 FunFam Receptor like protein kinase S.2 191 412 - -
Pral4563g00002 832 Gene3D Transferase(Phosphotransferase) domain 1 191 413 - -
Pral4563g00002 832 Gene3D Transferase(Phosphotransferase) domain 1 594 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4563g00002 Pral-Chr4563 13660 16610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4563g00002 503 796 Receptor kinase-like Gene Family AT3G53810 37.584 2.58e-53 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4563g00002 PK_Tyr_Ser-Thr 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4563g00002 - - gmx:100796108 1198.34