Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00198 ATGTTATTAGAATCACCAAGACTGGTTGCGAAGAAGGTTTTAGCCAAGTCCCTCCTGGAATCCAATGGAGCTCTTCTCAGAGGCTTTGGAAGAGAGTTGGACTGTCTGGATCCATTCGTGATGTTGATTCACTTCTCAGTGACTCCACCTGGAGGGTTTCCTGATCATCCCCACAGAGGTTTCGAGACCGTCACCTACATGCTGCAGGGAGCCATAAACTATCAAGATTTTGGTGGGCACAAGGGTACTTTAAGAACCGGGGACCTTCAGTGGGTGAGGGCAGGAAGAGGAATAGTTCACTCCGAAATGCCGGCAGAAGAAGGAACACACACAGGACTTCAGCTCTGGATCAATTTATCTTCCAAACATAAAATGATTGAACCTCGGTGCCGAGAGGTTGTGAGCAAGGAGATACCGAGCGTGGAGAGAGATGGAGCAGAAATTAGGGTTTTGGCGGGAGAAGCATTAGGGGTTAAAGCTCCAGTGTGGAGCAAGACTCCGATCATGATGCTGGACGTGACTGTGAAGCCCGCTTCACAGGTGCATTTGAGGACCCCGGAATCATGGTGGAACTACTTCGTGTACGTGATCGAAGGAGAGGCTGTGGTGGGGTGTGAGACGTCAGAGGCCATCGCGGCGGAGGAGGTGGCGGTGCTGGGCGGAGGAGATGGGGTGAGGGTGTGGAACAAGTCGGGGGAGAAGAGGATGAGGTTGGTGGTGGTAGGTGGAGAGGCGGTGAAGGAGAAAGTGGCGCAGAGGGGACCATTTGTGATGAGCACAGAGTCAGAGATAGAGGAAGCCATGGAAGATTTTCGTCTGTTTAGGAATGGCTTCGAGATGGCCAAGTCTTGGAAATCTAATCCCTAG 867 0.519 MLLESPRLVAKKVLAKSLLESNGALLRGFGRELDCLDPFVMLIHFSVTPPGGFPDHPHRGFETVTYMLQGAINYQDFGGHKGTLRTGDLQWVRAGRGIVHSEMPAEEGTHTGLQLWINLSSKHKMIEPRCREVVSKEIPSVERDGAEIRVLAGEALGVKAPVWSKTPIMMLDVTVKPASQVHLRTPESWWNYFVYVIEGEAVVGCETSEAIAAEEVAVLGGGDGVRVWNKSGEKRMRLVVVGGEAVKEKVAQRGPFVMSTESEIEEAMEDFRLFRNGFEMAKSWKSNP 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00198 288 Gene3D Jelly Rolls 139 246 IPR014710 -
Pral4561g00198 288 SUPERFAMILY RmlC-like cupins 31 286 IPR011051 -
Pral4561g00198 288 CDD cupin_pirin_N 30 119 - -
Pral4561g00198 288 PIRSF Pirin 5 285 IPR012093 -
Pral4561g00198 288 CDD cupin_pirin_C 167 244 - -
Pral4561g00198 288 Gene3D Jelly Rolls 31 272 IPR014710 -
Pral4561g00198 288 Pfam Pirin C-terminal cupin domain 170 276 IPR008778 -
Pral4561g00198 288 PANTHER PIRIN-RELATED 4 287 IPR012093 -
Pral4561g00198 288 Pfam Pirin 31 117 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00198 Pral-Chr4561 1032528 1034511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00198 6 282 Calmodulin-binding Proteins AT3G59220 53.214 4.27e-105 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00198 K06911 - mnt:21404588 352.443