Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00197 ATGAGAGCCATAAGGAACATTTTGGGATTCAACTGGAGTGATTCTTTTAATTCTACTTCTGGCCTTAGAAGCATCAACAGCAGAAAAACTTTCTCCTTCGTTAGAAATATCATGTCGCAGTCAGATGAATCGCCTGCTTTTAGCAAACCCAGATTGGTACTCAAGAAAGTGTTTGCCAGAAATGTAAATGAAGGAAGTCGTCTAATGGTTAACAGGACCATTGCAAGCGAGTTCAAGGGTTTGGATCCTTTCTTGAACATGGATCACTTTTCAGTGACTTACCCTGGAGGATTCACTGATCATCCGCATAGAGGCTTTGAAACTGTCACCTATATGCTAGAGGGAGCATTAGTTCATCAAGATTTTGCTGGCAATAAAGGAACAATAAGAGCTGGTGATGTTCAATGGATGTCTGCAGGCAGAGGGATCATTCACTCTGAGATGCCTGCAGGAGTGGGCACACATACTGGAGTGCAGCTATGGATCAATCTTTCCAAGAAAGACAAAATGATTGAACCAAAGTATCAGGATCTGCTAAAGGAGAACATTCCAAGAGCAGAGAAAGATGGGGTTGAAGTAAAAGTGATAGCAGGCGAGGCATTAGGGGTTCAATCAGAGGTGTACACGAGAACTCCAGCCATGTTTCTTGATTTCAAGCTCAACCCACAAACCCAAATGCACCAGAACATTCCAGAGACTTGGAATTCCTTTGCGTATGTGCTTGAAGGAGAAGGAGTATTTGGCTCCCCGAGCTCATCTCCAATTGGACCCTGCAATGTGGTGTTCTTGGGGCCTGGAGATGGTGTGAGCGTGTGGAACAAATCTTCTGAGCCACTGAGGTTTCTGCTGATAGGTGGCGAGCCATTGAAGGAGCCAGTGGCTCAGTATGGTCCTTTTGTGATGAACGCACATTCTGAGATTGAGAAGGCCATGGAGGACTTCCAGTATTGCAAGAATGGTTTTGAGAATGGCAGGCATTGGAGGTCTTCGTGA 993 0.4502 MRAIRNILGFNWSDSFNSTSGLRSINSRKTFSFVRNIMSQSDESPAFSKPRLVLKKVFARNVNEGSRLMVNRTIASEFKGLDPFLNMDHFSVTYPGGFTDHPHRGFETVTYMLEGALVHQDFAGNKGTIRAGDVQWMSAGRGIIHSEMPAGVGTHTGVQLWINLSKKDKMIEPKYQDLLKENIPRAEKDGVEVKVIAGEALGVQSEVYTRTPAMFLDFKLNPQTQMHQNIPETWNSFAYVLEGEGVFGSPSSSPIGPCNVVFLGPGDGVSVWNKSSEPLRFLLIGGEPLKEPVAQYGPFVMNAHSEIEKAMEDFQYCKNGFENGRHWRSS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00197 330 CDD cupin_pirin_C 212 288 - -
Pral4561g00197 330 Pfam Pirin 75 162 IPR003829 -
Pral4561g00197 330 Pfam Pirin C-terminal cupin domain 215 320 IPR008778 -
Pral4561g00197 330 PIRSF Pirin 49 328 IPR012093 -
Pral4561g00197 330 SUPERFAMILY RmlC-like cupins 75 328 IPR011051 -
Pral4561g00197 330 CDD cupin_pirin_N 70 164 - -
Pral4561g00197 330 Gene3D Jelly Rolls 65 315 IPR014710 -
Pral4561g00197 330 Gene3D Jelly Rolls 184 289 IPR014710 -
Pral4561g00197 330 PANTHER PIRIN-RELATED 38 329 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00197 Pral-Chr4561 1028191 1030293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00197 48 325 Calmodulin-binding Proteins AT3G59220 58.719 2.58e-114 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00197 K06911 - zju:125423505 436.417