Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00196 ATGAGAGCCATCAGGCACAGCTTTTCACTGTTCAATTGGCGGCCTTTTCCTCCTCCTCCTCCTTCAACTGCCTCTGCACTTTCATCTCTCCCAATTATCATGTCGTCACAATCAGATCAATCTTCGGCTTTCGAAACGCCCAGGTTGGTTCTCAAGAAGGTGTTGGCCAAATCTCAACATGAAGGTGATGGTGCTGTTGTTAGGAGAGCCCTCGGAAGGAGCGAGTTGAAGAGTTTGGATCCCTTTCTGATGATGGATCACTTCTCAGTGTCTCCACCCGGAGGTTTCCCTGACCATCCACACAGAGGTTTTGAAACTGTCACATACATGCTGCAGGGAGCCATAACTCATCAAGATTTTGCTGGGCATACGGGTACCATAAGAACAGGTGATGTTCAGTGGATGACCGCAGGCAGAGGAATAATTCACTCCGAAATGCCTGGAGGAGAAGGAACCCACAAGGGATTGCAGCTATGGATCAATTTATCTTCCAAAGATAAGATGATTGAACCAAATTATCAAGAACTTCCAAAAGAGGACATACCAGTAGCGGAACAAGATGGGGTTGAAGTGAGGGTTATAGCAGGAGAAGCAATGGGAGTTCATTCACCTGTTTACACCAGAACCCCAACCATGTTCCTTGATTTCTCTCTCAGCCCAGGAGCTGAATGGCATCAGAACATTCCAGAATCATGGAACGCCTTTGTTTATGTGATTGAAGGAGAAGGGGTTTTTGGGTCTGTGAGTTCTTCACCAGTGGCGGCTCACTATGTGCTGGTCTTGACCCTTGGAGATGGTCTAAGTGTCTGGAACAGATCTTCAAAGCCTCTGAGGTTTGTGTTGATTGCAGGCCAGCCACTAAATGAACCAGTGGTTCAATATGGACCCTTTGTGATGAATACACAGTCTGAGATTGAAAAGACCATAGAGGACTATCAATATTGCAAGAATGGATTTGAGATGGGGAGATATTGGAGATCTCAACAGTAA 990 0.4616 MRAIRHSFSLFNWRPFPPPPPSTASALSSLPIIMSSQSDQSSAFETPRLVLKKVLAKSQHEGDGAVVRRALGRSELKSLDPFLMMDHFSVSPPGGFPDHPHRGFETVTYMLQGAITHQDFAGHTGTIRTGDVQWMTAGRGIIHSEMPGGEGTHKGLQLWINLSSKDKMIEPNYQELPKEDIPVAEQDGVEVRVIAGEAMGVHSPVYTRTPTMFLDFSLSPGAEWHQNIPESWNAFVYVIEGEGVFGSVSSSPVAAHYVLVLTLGDGLSVWNRSSKPLRFVLIAGQPLNEPVVQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGRYWRSQQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00196 329 CDD cupin_pirin_C 210 286 - -
Pral4561g00196 329 Gene3D Jelly Rolls 61 313 IPR014710 -
Pral4561g00196 329 Gene3D Jelly Rolls 182 287 IPR014710 -
Pral4561g00196 329 PIRSF Pirin 46 326 IPR012093 -
Pral4561g00196 329 SUPERFAMILY RmlC-like cupins 48 326 IPR011051 -
Pral4561g00196 329 CDD cupin_pirin_N 65 162 - -
Pral4561g00196 329 PANTHER PIRIN-RELATED 34 328 IPR012093 -
Pral4561g00196 329 FunFam pirin 61 197 - -
Pral4561g00196 329 Pfam Pirin C-terminal cupin domain 213 318 IPR008778 -
Pral4561g00196 329 Pfam Pirin 67 160 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00196 Pral-Chr4561 1024629 1027073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00196 46 323 Calmodulin-binding Proteins AT3G59220 63.929 2.56e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00196 K06911 - gmx:100775597 519.62