Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00194 ATGGTGAACCTCATGGAATGGCAGAAGCAGCAGCAGCAGCAGCAGAGCGGGAATGCTAATAATGGAAACGGAGGAATGATGTACGTGAAGGTGATGACCGATGACCAGTTGGAAACTCTCAGGCAGCAAATCGCTGTCTATACCTCCATTTGCGAGCAGCTCGTTGAGATGCACAAGACTCTCACTGCTCAGCAGGATCTTGCAGGGGTTCGGCTGGGAAATATATACTGTGACCCATTGATGACTTCTGCTGGACACAAAATAACTTCCCGACAGCGGTGGACTCCAACGCCCGTGCAACTTCAGATTCTTGAGCGTATATTTGATCAGGGGAACGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTACTGCTGAACTGAGCCAGCATGGCCAGATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCTCGATCAAAAAGAAAGCAGCAAAATGTGGCACCCAATAACACTGAATCTGAAGTAGAGACTGAAGCTGAATCTTCCAAGGATAAGAAAACAAAACCCGAGGAGTTTCAGTCCCAACATAGTGCATCAACCAGGGCTGAAGATTTGTGCTTTCAGAATCATGAAGTCTGCTCTGAGTTGCACTACTTGAATCCAGACTCCTGTAAACCAGAATCCATGTTTCCATCAGATGGCAGTCTGAAAAATACAAGAAGTTTCGGCCAAATGTCTGTTTTTGATGGAATGCTATCAAACTCGAGGGATGGATATATCACTGGAAAAATGCAAGTGCCCGGAAGCTACAATTTATACCAGCAAGCTGGAGACTACAGCATGACGGGTTGA 822 0.4574 MVNLMEWQKQQQQQQSGNANNGNGGMMYVKVMTDDQLETLRQQIAVYTSICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSAGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNTESEVETEAESSKDKKTKPEEFQSQHSASTRAEDLCFQNHEVCSELHYLNPDSCKPESMFPSDGSLKNTRSFGQMSVFDGMLSNSRDGYITGKMQVPGSYNLYQQAGDYSMTG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00194 273 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 271 IPR044559 GO:0003700
Pral4561g00194 273 SUPERFAMILY Homeodomain-like 89 154 IPR009057 -
Pral4561g00194 273 MobiDBLite consensus disorder prediction 166 182 - -
Pral4561g00194 273 MobiDBLite consensus disorder prediction 149 188 - -
Pral4561g00194 273 SMART HOX_1 89 156 IPR001356 GO:0003677
Pral4561g00194 273 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Pral4561g00194 273 CDD homeodomain 91 153 IPR001356 GO:0003677
Pral4561g00194 273 Pfam Homeodomain 91 151 IPR001356 GO:0003677
Pral4561g00194 273 Gene3D - 93 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00194 Pral-Chr4561 1011084 1013905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00194 4 273 Wox Gene Family AT4G35550 50.671 6.54e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral4561g00194 Homeodomain 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00194 - - qsu:112005537 410.223