Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00182 ATGACACAGGCTATAAGCACTGCTTTGCTGCTGAAAGAGAAGGAAGAGGAGCCGGTTACAGTAAACCGGTTAGAGGCTGCCGATTCAGTGGTGGACGTTGGGGGCTCAGACTGTTTGGTCGGTCTAGAATGCTTTCTGAACATTGTCAGGGCACTGGGGATGGGATCATGCCTCTCTGTGGCCCATCCCCTCCCTTGTTCACCTGAATCCACTTCGGACATCGCGAAGCGAAGGAGGAGATTAAGGAGCAACTGTTCGCTTGATTCTAAAACGGAATTGGGCCTACATAAAATCCCAGGGAGAATGTTCGTAAATGGATCCAGTGAGGTTGCGTCCCTGTTCTGCAAGCAAGGCAAAAAGGGGATCAACCAGGATGCCATGCTTGTTTGGGAGAACTTCCGTTCAAAGGACACCATTTTTTGTGGAGTTTTCGATGGTCATGGCCCTAGTGGTCATAGGGTAGCAAGGAGAGTCAGGGATTATTTCCCTTTAAGGCTTATTGCCCAATGGGAATTGCATCATAACAATAAGGATGGACTAAGTGATATCGGAAATGCTACTGCAAACCATAAGTCAGGGGAGATTGGGTTTAGAATGGTTGATGAGAAACCTGGTCTTCCTGATCATGAGCACAGTTGTACTAATGCTTTGAAGACGCTGAAGGAATCTTTTCTGAAGGCTTGCAAGATTATGGACAAGGAATTGAAATTGCATCCTGGTATCGATTGCTTTTGCAGCGGGACAACAGCAGTCACCTTGGTCAAACAGGGGCAGGATCTTGTTATTGGAAATGTTGGGGATTCAAGAGCTATATTGGGTACTAGGGATCATGATAATTCTCTTACTGCTGTTCAGTTGACCATTGACCTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATCAAGCGTTGCAGAGGACGGGTATTTGCTCTTCGTAATGAACCTGAGGTTGCTCGAGTTTGGTTGCCCAATGCTGACTCCCCAGGCCTTGCTATGGCACGAGCTTTTGGAGATTTTATTCTTAAAGACTTTGGTCTGATATCTGTTCCCGATGTCTCCCATCACCGCCTTACTGAGAAGGATGAATTTGTTGTGTTAGCCACAGATGGGATTTGGGATGTTCTGTCGAACCAAGAAGTTGTAGACATTGTGGCATCTGTGTCACGCTCCTCCGCAGCCCGAACACTCGTTGAGACTGCTGTTCGAGCATGGAGGACAAAGTACCCTACTTCCAAAATTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCAGACCCGAAGGCAGTTCACCCCACAGACAAGGAGATGCCCGAGGCATCGGCTAACCACCAGTCTGAGGGATCTCCTCCCGAAACTGGAGTCAACTGTTCAGAAAAATCTATTGCTTCCCTTGAGAATTTTCCTGTGCTTGGGAAGGAAGGAGATGGAGTAGAAGCTGTACAGCAGTAG 1458 0.4719 MTQAISTALLLKEKEEEPVTVNRLEAADSVVDVGGSDCLVGLECFLNIVRALGMGSCLSVAHPLPCSPESTSDIAKRRRRLRSNCSLDSKTELGLHKIPGRMFVNGSSEVASLFCKQGKKGINQDAMLVWENFRSKDTIFCGVFDGHGPSGHRVARRVRDYFPLRLIAQWELHHNNKDGLSDIGNATANHKSGEIGFRMVDEKPGLPDHEHSCTNALKTLKESFLKACKIMDKELKLHPGIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDHDNSLTAVQLTIDLKPNLPREEERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDVSHHRLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSSAARTLVETAVRAWRTKYPTSKIDDCAVVCLFFDSDSDPKAVHPTDKEMPEASANHQSEGSPPETGVNCSEKSIASLENFPVLGKEGDGVEAVQQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00182 485 Pfam Protein phosphatase 2C 199 406 IPR001932 -
Pral4561g00182 485 SUPERFAMILY PP2C-like 110 424 IPR036457 -
Pral4561g00182 485 PANTHER PROTEIN PHOSPHATASE 88 421 IPR015655 GO:0004722|GO:0006470
Pral4561g00182 485 SMART PP2C_4 104 421 IPR001932 -
Pral4561g00182 485 MobiDBLite consensus disorder prediction 444 461 - -
Pral4561g00182 485 MobiDBLite consensus disorder prediction 431 461 - -
Pral4561g00182 485 CDD PP2Cc 110 423 IPR001932 -
Pral4561g00182 485 ProSiteProfiles PPM-type phosphatase domain profile. 110 423 IPR001932 -
Pral4561g00182 485 Gene3D - 105 425 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00182 Pral-Chr4561 931837 935861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00182 54 425 PP2C-type Phosphatase Gene Family AT3G02750 56.744 4.06e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00182 - - gmx:100802479 597.816