Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral4561g00159 | ATGGGGATTCCAGAGGATGACCCTGTTACCCCAATTCTCAAGGTCGGAGAGGAGAAGGAGATAGGAAAGAATGGCCTGAAGAAGAAGTTGGTTAAGGAGGGGGAAGGATGGGAGACTCCAAACGCCGGAGACGAGGTGGAAGTTCACTACACCGGGACACTGTTGGACGGAACTCAGTTTGATTCTAGCCGTGACAGGGGAACCCCATTTAAGTTCAAACTTGGGCAAGGGCGCGTAATAAAGGGATGGGACGAAGGCATCAAAACCATGAAGAAAGGTGAAAATGCCATTTTTACAATACCTCCAGAGTTGGCCTATGGAGAGTCAGGATCTCCCCCGACTATTCCCCCCAATGCAACCCTACAATTTGATGTGGAGTTGCTGTCTTGGAGCAGTGTGAAGGACATAAGCAAGGATGGGGGTATCTTGAAAGAAATTCTCTCCGAAGGAGAGAGTTGGGAAAATCCCAAGGATCTGGATGAAGTATTTGTTAAGTATGAAGCCAGGCTCGACAATGGGACCGTCATTTCTAAATCTGATGGTGTGGAGTTTACCGTGGAAGTTGGCTATTTTTGTCCTGCTCTGGCCAAGGCTGTGAAAACAATGAAGAAAGGAGAGAAAGTCCTTTTGACTGTGAAGCCACAATATGCATTTGGCGAGAACGGAAGGCCAGCATCTGGTGACGAAGGCGCTGTACCTCCTAATTCGTCAGTTCAAATTAATCTTGAATTGCTATCTTGGAAGACTGTAACTGACATTACTAAGGACAAGAAAGTTCTCAAAAAGACTTTGAAGGAGGGGGAGAAATATGAGCGACCCAATGATGGATCTGTTGTCCGAGTGCGGCTTATTGGCAAGCTGCAAAATGGGACCGTTTTCACCAAGAAGGGTTATGATGAGGAGCAACCCTTCGAGTTTAAAGTAGATGAAGAGCAAGTGATTGAGGGACTCGACCAAGCCGTGAAGAACATGAAGAAAGGGGAAATTGCATGGGTGACCATACAACCTGAATACGCCTTTGGCGCCTCTGGCTCTCCCCAAGAACTTGCTGCTGTTCCTCCTAATTCAACTGTATACTATGAAGTGGAGCTGATTTCATTTGAGAAGGAAAAGGAATCGTGGGAGTTGAACACAACAGAGAAGATTGATGCAGCAGGAAGGAAAAAGGAAGAAGGGAACGTTTATTTCAAGGCCGGTAAATATGATAGAGCATCGAAGAGATATAAGAAGGCCATGAGTGCTGCCTGCATGCTGAAGCTTAAAGACTACAAGGAAGCAGTGAAGTTGTGCACAAAGGTATTGGAGCTTGATAGTGGGAATGTGAAAGCTTTGTACCGGAGGGCACAAGCATATATACAACTTGTGGATTTGGACCTTGCTGAAATGGACATTAAGAAGGCCCTTGAAATTGAGCCAGACAATAGGGACTTGAAAGTGGAGTACAAAATTTTGAAGGAGAAAGTGAGAGAATACAATAAGAAGGATGCGCAGTTCTATGGAAGCATGTTTGCGAAAATGAACAAGCTTGAACAAACTAGAAAAGCAAATACAGCAGCAGAACCTCAGCACATGCCAATAACTATCGATAGCAAAGCATAA | 1599 | 0.4515 | MGIPEDDPVTPILKVGEEKEIGKNGLKKKLVKEGEGWETPNAGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGQGRVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWSSVKDISKDGGILKEILSEGESWENPKDLDEVFVKYEARLDNGTVISKSDGVEFTVEVGYFCPALAKAVKTMKKGEKVLLTVKPQYAFGENGRPASGDEGAVPPNSSVQINLELLSWKTVTDITKDKKVLKKTLKEGEKYERPNDGSVVRVRLIGKLQNGTVFTKKGYDEEQPFEFKVDEEQVIEGLDQAVKNMKKGEIAWVTIQPEYAFGASGSPQELAAVPPNSTVYYEVELISFEKEKESWELNTTEKIDAAGRKKEEGNVYFKAGKYDRASKRYKKAMSAACMLKLKDYKEAVKLCTKVLELDSGNVKALYRRAQAYIQLVDLDLAEMDIKKALEIEPDNRDLKVEYKILKEKVREYNKKDAQFYGSMFAKMNKLEQTRKANTAAEPQHMPITIDSKA | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral4561g00159 | 532 | SMART | tpr_5 | 407 | 440 | IPR019734 | GO:0005515 | |
| Pral4561g00159 | 532 | SMART | tpr_5 | 441 | 474 | IPR019734 | GO:0005515 | |
| Pral4561g00159 | 532 | FunFam | Peptidylprolyl isomerase | 16 | 134 | - | - | |
| Pral4561g00159 | 532 | Gene3D | - | 249 | 368 | IPR046357 | GO:0003755 | |
| Pral4561g00159 | 532 | Gene3D | Tetratricopeptide repeat domain | 369 | 412 | IPR011990 | GO:0005515 | |
| Pral4561g00159 | 532 | Coils | Coil | 474 | 494 | - | - | |
| Pral4561g00159 | 532 | Gene3D | - | 18 | 134 | IPR046357 | GO:0003755 | |
| Pral4561g00159 | 532 | FunFam | Peptidylprolyl isomerase | 135 | 248 | - | - | |
| Pral4561g00159 | 532 | Gene3D | - | 135 | 248 | IPR046357 | GO:0003755 | |
| Pral4561g00159 | 532 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 276 | 368 | IPR001179 | GO:0003755 | |
| Pral4561g00159 | 532 | Gene3D | Tetratricopeptide repeat domain | 413 | 505 | IPR011990 | GO:0005515 | |
| Pral4561g00159 | 532 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 43 | 131 | IPR001179 | GO:0003755 | |
| Pral4561g00159 | 532 | SUPERFAMILY | TPR-like | 377 | 507 | IPR011990 | GO:0005515 | |
| Pral4561g00159 | 532 | FunFam | Peptidylprolyl isomerase | 249 | 370 | - | - | |
| Pral4561g00159 | 532 | ProSiteProfiles | TPR repeat profile. | 441 | 474 | IPR019734 | GO:0005515 | |
| Pral4561g00159 | 532 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 271 | 365 | IPR001179 | GO:0003755 | |
| Pral4561g00159 | 532 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 154 | 245 | IPR001179 | GO:0003755 | |
| Pral4561g00159 | 532 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 38 | 128 | IPR001179 | GO:0003755 | |
| Pral4561g00159 | 532 | Pfam | Tetratricopeptide repeat | 419 | 474 | - | - | |
| Pral4561g00159 | 532 | SUPERFAMILY | FKBP-like | 17 | 134 | - | - | |
| Pral4561g00159 | 532 | SUPERFAMILY | FKBP-like | 135 | 252 | - | - | |
| Pral4561g00159 | 532 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 139 | 251 | - | - | |
| Pral4561g00159 | 532 | SUPERFAMILY | FKBP-like | 253 | 384 | - | - | |
| Pral4561g00159 | 532 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 159 | 248 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral4561g00159 | Pral-Chr4561 | 785305 | 788625 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral4561g00159 | 3 | 532 | Calmodulin-binding Proteins | AT5G48570 | 69.039 | 0.0 | 770 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral4561g00159 | K09571 | - | qsa:O6P43_023604 | 866.3 |