Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00158 ATGGATGAGGACTTTGAGTTCCCTACTGCTGCTAACACGGGCATCGAAGACGAAGATATGGGGATTCCAGAGGATGACCCTGTTACCCCAATTCTCAAGGTCGGAGAGGAGAAGGAGATAGGAAAGAATGGCCTGAAGAAGAAGTTGGTTAAGGAGGGGGAAGGATGGGAGACTCCAAACGCCGGAGACGAGGTGGAAGTTCACTACACCGGGACACTGTTGGACGGAACTCAGTTTGATTCTAGCCGTGACAGGGGAACCCCATTTAAGTTCAAACTTGGGCAAGGGCGCGTAATAAAGGGATGGGACGAAGGCATCAAAACCATGAAGAAAGGTGAAAATGCCATTTTTACAATACCTCCAGAGTTGGCCTATGGAGAGTCAGGATCTCCCCCGACTATTCCCCCCAATGCAACCCTACAATTTGATGTGGAGTTGCTGTCTTGGAGCAGTGTGAAGGACATAAGCAAGGATGGGGGTATCTTGAAAGAAATTCTCTCCGAAGGAGAGAGTTGGGAAAATCCCAAGGATCTGGATGAAGTATTTGTTAAGTATGAAGCCAGGCTCGACAATGGGACCGTCATTTCTAAATCTGATGGTGTGGAGTTTACCGTGGAAGTTGGCTATTTTTGTCCTGCTCTGGCCAAGGCTGTGAAAACAATGAAGAAAGGAGAGAAAGTCCTTTTGACTGTGAAGCCACAATATGCATTTGGCGAGAACGGAAGGCCAGCATCTGGTGACGAAGGCGCTGTACCTCCTAATTCGTCAGTTCAAATTAATCTTGAATTGCTATCTTGGAAGACTGTAACTGACATTACTAAGGACAAGAAAGTTCTCAAAAAGACTTTGAAGGAGGGGGAGAAATATGAGCGACCCAATGATGGATCTGTTGTCCGAGTGCGGCTTATTGGCAAGCTGCAAAATGGGACCGTTTTCACCAAGAAGGGTTATGATGAGGAGCAACCCTTCGAGTTTAAAGTAGATGAAGAGCAAGTGATTGAGGGACTCGACCAAGCCGTGAAGAACATGAAGAAAGGGGAAATTGCATGGGTGACCATACAACCTGAATACGCCTTTGGCGCCTCTGGCTCTCCCCAAGAACTTGCTGCTGTTCCTCCTAATTCAACTGTATACTATGAAGTGGAGCTGATTTCATTTGAGAAGGAAAAGGAATCGTGGGAGTTGAACACAACAGAGAAGATTGATGCAGCAGGAAGGAAAAAGGAAGAAGGGAACGTTTATTTCAAGGCCGGTAAATATGATAGAGCATCGAAGAGATATAAGAAGGCCATGAGGTATATTGAATATGACTCCAGTTTTAATGATGAGGAGAAGCGGCAGTCCAAAGTGCTGAAAATCTCAATTAACCTTAACAGTGCTGCCTGCATGCTGAAGCTTAAAGACTACAAGGAAGCAGTGAAGTTGTGCACAAAGGTATTGGAGCTTGATAGTGGGAATGTGAAAGCTTTGTACCGGAGGGCACAAGCATATATACAACTTGTGGATTTGGACCTTGCTGAAATGGACATTAAGAAGGCCCTTGAAATTGAGCCAGACAATAGGGACTTGAAAGTGGAGTACAAAATTTTGAAGGAGAAAGTGAGAGAATACAATAAGAAGGATGCGCAGTTCTATGGAAGCATGTTTGCGAAAATGAACAAGCTTGAACAAACTAGAAAAGCAAATACAGCAGCAGAACCTCAGCACATGCCAATAACTATCGATAGCAAAGCATAA 1737 0.4491 MDEDFEFPTAANTGIEDEDMGIPEDDPVTPILKVGEEKEIGKNGLKKKLVKEGEGWETPNAGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGQGRVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWSSVKDISKDGGILKEILSEGESWENPKDLDEVFVKYEARLDNGTVISKSDGVEFTVEVGYFCPALAKAVKTMKKGEKVLLTVKPQYAFGENGRPASGDEGAVPPNSSVQINLELLSWKTVTDITKDKKVLKKTLKEGEKYERPNDGSVVRVRLIGKLQNGTVFTKKGYDEEQPFEFKVDEEQVIEGLDQAVKNMKKGEIAWVTIQPEYAFGASGSPQELAAVPPNSTVYYEVELISFEKEKESWELNTTEKIDAAGRKKEEGNVYFKAGKYDRASKRYKKAMRYIEYDSSFNDEEKRQSKVLKISINLNSAACMLKLKDYKEAVKLCTKVLELDSGNVKALYRRAQAYIQLVDLDLAEMDIKKALEIEPDNRDLKVEYKILKEKVREYNKKDAQFYGSMFAKMNKLEQTRKANTAAEPQHMPITIDSKA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00158 578 Gene3D - 154 267 IPR046357 GO:0003755
Pral4561g00158 578 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 290 384 IPR001179 GO:0003755
Pral4561g00158 578 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 264 IPR001179 GO:0003755
Pral4561g00158 578 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 147 IPR001179 GO:0003755
Pral4561g00158 578 Gene3D - 37 153 IPR046357 GO:0003755
Pral4561g00158 578 SUPERFAMILY FKBP-like 271 403 - -
Pral4561g00158 578 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Pral4561g00158 578 FunFam Peptidylprolyl isomerase 268 389 - -
Pral4561g00158 578 SUPERFAMILY FKBP-like 31 153 - -
Pral4561g00158 578 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 178 267 IPR001179 GO:0003755
Pral4561g00158 578 ProSiteProfiles TPR repeat profile. 404 437 IPR019734 GO:0005515
Pral4561g00158 578 FunFam Peptidylprolyl isomerase 154 267 - -
Pral4561g00158 578 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 150 IPR001179 GO:0003755
Pral4561g00158 578 FunFam Peptidylprolyl isomerase 35 153 - -
Pral4561g00158 578 SUPERFAMILY TPR-like 396 553 IPR011990 GO:0005515
Pral4561g00158 578 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 158 270 - -
Pral4561g00158 578 FunFam Peptidylprolyl isomerase 392 547 - -
Pral4561g00158 578 Gene3D - 268 388 IPR046357 GO:0003755
Pral4561g00158 578 Coils Coil 520 540 - -
Pral4561g00158 578 Gene3D Tetratricopeptide repeat domain 390 547 IPR011990 GO:0005515
Pral4561g00158 578 SMART tpr_5 404 437 IPR019734 GO:0005515
Pral4561g00158 578 SMART tpr_5 453 486 IPR019734 GO:0005515
Pral4561g00158 578 SMART tpr_5 487 520 IPR019734 GO:0005515
Pral4561g00158 578 MobiDBLite consensus disorder prediction 1 28 - -
Pral4561g00158 578 Pfam Tetratricopeptide repeat 465 520 - -
Pral4561g00158 578 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Pral4561g00158 578 SUPERFAMILY FKBP-like 154 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00158 Pral-Chr4561 784953 788625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00158 22 578 Calmodulin-binding Proteins AT5G48570 72.242 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00158 K09571 - qsa:O6P43_023604 936.021