Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00146 ATGTATCTCTTCTCTTCTACCTCCCATTCTCTTGTTCAGATCTCAATGGCTTGCCCAAAACTGAAAACCCTAGTTTCTCTCTCTATACTCATTTTCTCTCTCCTCTCCTCCGCCATAGCCGATGATGCAGCTTTCATGTCCAAGCTCGCCAAAGCCCTCTCCAATCCCTCTGGCTGGTCCAGCAGCACCTCATTCTGCAAATGGGACGGCGTCAGATGCGACGGCTCCAACCGCGTCACCTCTATCAACCTTGCTTCCAAGTTTCTTTCTGGCACTCTTCCTTCTGATCTTAACTCTCTCTCAGAGTTAACTTCCCTTTCTCTTCAGAATAATGCCCTCTCCGGTCCTTTACCGTCTCTGGCAAACCTCACTTCGCTTGAAACTGTGTTTCTTGACTTCAACAATTTCACCTCCATCCCTGATGGTTGCTTCCAAGGGCTCACCAGCTTGCAGACCCTCAGCTTGAGCAACAACGCCAACCTTGCACCCTGGACGTTTCCGACCGATTTGACTCAGTCTTCGAATCTGGGGACTCTTGATCTCGGAACGTCTAATCTCGTGGGCACTTTGCCAGATGTTTTTGATTCTTTACCGAGCTTGCAGAGCGTGCGTCTTTCTTACAACAACCTCACTGGTGGGTTGCCTGCCTCGTTTAATGGATCTGGAATTGCAAAGTTGTGGCTTAACAATCAACGTGATGGATTATCCGGTACAATCGACGTGTTATCATCGATGACGCAGTTGTCTCAGGTTTGGCTTCAGAAAAACCAGTTCACAGGTCCCATTCCTGACTTGTCCAATTGCAAGAATTTATTTGATTTGCAGCTTCGTGACAATCAGTTAACTGGCGTAGTCCCACCTTCTTTGAGTACTCTCTCGAGCTTGCAGAACGTTTCTCTGGACAATGATAAGCTGCAGGGCCCGATGCCTGTGTTTGGCAAAGGTGTGAAGGCTACTCTTGATGGGAATAGCTTTTGTAAACCTACTTCGGGATCTTGTGATGATCGTGTTACGAAGTTGCTTGAGATCGCTGCAGCTTTTGGGTATCCGGTAAAGTTGGCAGATTCATGGGAAGGCAATGACCCCTGCAATGATTGGAGTTTCATTGTGTGCACAGATGGAAAGATTACCACGGTGAATATGGCGAAGCAGAACTTCGGGGGAAAAATCTCACCTGCATTTGCAAATTTAACGGACTTAAGGAACTTGTATCTGAGTGGCAATAATTTGACTGGCTCAATACCAGAGAGCTTGACAACTTTGCCTCAACTTGAGATTCTTGATGTGTCTAACAACAATTTATCTGGAAAGGTTCCTAAATTCTCATCAAAGGTGAAGCTGACATATACTGGTAATGTTTTGATCGGAAAAACTACTGGTTCCGGAGGAGAAAACGGAGGTAGTCCTACCCCAGGGTCTGGCGATATTTCACCTGCTGGAAGTACATCTGGAAAGGCAACTAGCACGTCATTGTCATCTGGTTGGATTGCAGGTATAGTCATTATTGTCCTATTTTTTGTGGCGGTGGTGTTGTTTGTCTCATGTAAATGTTATGCTAAAAATCGTCATCAGAAATTTGGAAGGGTTAGCAATCCTGAAAATGGAAAGGGAGATGTTAAAATTGATGTATCGGGTGTTTCCAATGGATATGCTGGAGTTCCAAGCGATTTACATAGCCAGAGCAGTGGCGACCGTAGTGACCTTCATGTTTTTGACGGTGGCAATGCTACAATTTCAATTCAAGTTCTTCGCCAAGTAACAAATAATTTCAGTGAAGATAACATTTTGGGCAGGGGGGGATTTGGAGTTGTTTACAAAGGGGAATTGCATGATGGAACAAAAATTGCTGTGAAGAGGATGGAATCTGTTGCAATGGGAAGCAAAGGATTGAATGAATTCCAAGCAGAGATTGCAGTCCTTACAAAAGTTAGGCACAGGCATCTGGTTGCTCTTTTAGGATATTGCATTAATGGTAATGAAAGGCTGTTAGTTTATGAGTACATGCCTCAAGGCACGCTAACACAACATCTTTTTGAATGGAGTGAGAAGGGGTGCGCAGCTCTGACTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTGGCAAGGGGAGTGGAATATTTGCACAGCTTAGCTCAACAAAGCTTCATTCACAGAGACTTGAAGCCTTCAAACATACTTCTAGGTGATGACATGAGAGCGAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCTGATGGAAAGTATTCTGTTGAGACACGTTTGGCTGGAACTTTTGGGTACCTTGCACCTGAATATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGGGTTGTTTTGATGGAATTGATCACTGGTAGAAAGGCATTGGATGACACTGTCCCAGATGAAAGGTCTCACTTGGTGTCATGGTTCCGCAGGGTTCTAATTAACAAAGATAACATCCCGAAGGCTATTGATCAAATTCTAGACCCTGACGAGGAGACGATGGAGAGCATATATAAGGTCGCCGAGCTTGCAGGGCACTGTACTGCTCGCGAGCCATACCAAAGGCCAGACATGGGCCATGCAGTGAATGTGTTGGTTCCTCTTGTAGAACAGTGGAAACCAACTAACCACGAAGAAGAAGAAGGTTATGGAATTGACCTTCATATGAGCCTACCTCAAGCTCTGCAAAGATGGCAAGCCAACGAAGGCACTTCTGCAATGTTTAATGACATGTCCCTCTCACAAACCCAATCAAGCATCCCCTCTAAGCCTTCGGGCTTCGCAGACTCCTTCGGGTCAATGGATTGCAGGTAA 2817 0.453 MYLFSSTSHSLVQISMACPKLKTLVSLSILIFSLLSSAIADDAAFMSKLAKALSNPSGWSSSTSFCKWDGVRCDGSNRVTSINLASKFLSGTLPSDLNSLSELTSLSLQNNALSGPLPSLANLTSLETVFLDFNNFTSIPDGCFQGLTSLQTLSLSNNANLAPWTFPTDLTQSSNLGTLDLGTSNLVGTLPDVFDSLPSLQSVRLSYNNLTGGLPASFNGSGIAKLWLNNQRDGLSGTIDVLSSMTQLSQVWLQKNQFTGPIPDLSNCKNLFDLQLRDNQLTGVVPPSLSTLSSLQNVSLDNDKLQGPMPVFGKGVKATLDGNSFCKPTSGSCDDRVTKLLEIAAAFGYPVKLADSWEGNDPCNDWSFIVCTDGKITTVNMAKQNFGGKISPAFANLTDLRNLYLSGNNLTGSIPESLTTLPQLEILDVSNNNLSGKVPKFSSKVKLTYTGNVLIGKTTGSGGENGGSPTPGSGDISPAGSTSGKATSTSLSSGWIAGIVIIVLFFVAVVLFVSCKCYAKNRHQKFGRVSNPENGKGDVKIDVSGVSNGYAGVPSDLHSQSSGDRSDLHVFDGGNATISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGSKGLNEFQAEIAVLTKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFEWSEKGCAALTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPDERSHLVSWFRRVLINKDNIPKAIDQILDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEEGYGIDLHMSLPQALQRWQANEGTSAMFNDMSLSQTQSSIPSKPSGFADSFGSMDCR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00146 938 Gene3D Ribonuclease Inhibitor 335 459 IPR032675 -
Pral4561g00146 938 FunFam receptor protein kinase TMK1 668 885 - -
Pral4561g00146 938 Gene3D Ribonuclease Inhibitor 40 333 IPR032675 -
Pral4561g00146 938 Gene3D Transferase(Phosphotransferase) domain 1 668 889 - -
Pral4561g00146 938 FunFam Leucine-rich repeat receptor-like kinase 335 458 - -
Pral4561g00146 938 SMART LRR_typ_2 397 420 IPR003591 -
Pral4561g00146 938 SMART LRR_typ_2 123 146 IPR003591 -
Pral4561g00146 938 SMART LRR_typ_2 147 168 IPR003591 -
Pral4561g00146 938 SMART LRR_typ_2 197 220 IPR003591 -
Pral4561g00146 938 SMART LRR_typ_2 421 443 IPR003591 -
Pral4561g00146 938 Pfam Leucine rich repeat 393 434 IPR001611 GO:0005515
Pral4561g00146 938 Pfam Leucine rich repeat 125 158 IPR001611 GO:0005515
Pral4561g00146 938 FunFam Receptor-like kinase TMK4 40 331 - -
Pral4561g00146 938 MobiDBLite consensus disorder prediction 458 483 - -
Pral4561g00146 938 Gene3D Phosphorylase Kinase; domain 1 555 667 - -
Pral4561g00146 938 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Pral4561g00146 938 ProSiteProfiles Protein kinase domain profile. 590 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4561g00146 938 SMART serkin_6 590 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4561g00146 938 PANTHER OSJNBA0070M12.3 PROTEIN 25 938 - -
Pral4561g00146 938 Pfam Leucine rich repeat N-terminal domain 46 74 IPR013210 -
Pral4561g00146 938 Pfam Leucine rich repeat N-terminal domain 340 371 IPR013210 -
Pral4561g00146 938 MobiDBLite consensus disorder prediction 916 938 - -
Pral4561g00146 938 SUPERFAMILY Protein kinase-like (PK-like) 568 866 IPR011009 -
Pral4561g00146 938 FunFam receptor protein kinase TMK1 552 667 - -
Pral4561g00146 938 CDD STKc_IRAK 596 869 - -
Pral4561g00146 938 ProSiteProfiles Leucine-rich repeat profile. 399 422 IPR001611 GO:0005515
Pral4561g00146 938 Pfam Protein tyrosine and serine/threonine kinase 593 862 IPR001245 GO:0004672|GO:0006468
Pral4561g00146 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Pral4561g00146 938 SUPERFAMILY L domain-like 53 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00146 Pral-Chr4561 694261 698395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00146 79 866 Receptor kinase-like Gene Family AT5G07280 32.890 1.70e-97 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pral4561g00146 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00146 K00924 - gmx:100781851 1380.93