Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00123 ATGGCATTTTGCAATAAGCTTGGGAATCTTTTAAGGCAGGGTGCTGCACAAAACAGACAAGTACCAGTTGCATCAATGCTCAATTATGTTCGCTGCATGTCCTCCTCCAAGCTTTTCATTGGCGGCCTTTCTTATGGAGTTGATGATCAATCTCTCAGGGATGCATTTGCTAGCTTTGGAGATGTGGTTGAGGCAAGGGTTATAACTGACAGAGACACTGGAAGGTCAAGAGGGTTTGGATTTGTTAATTTCTCCAGTGATGACTCTGCAAGTTCAGCTCTTTCTGCAATGGATGGGCAGGAGCTAAATGGGAGAAACATTCGGGTGAGCTATGCAACTGATAGACCGGCTAGACCTCGTTCCTTTGGTGGCGGCGGCGGATATGGTGGTGGTTTTGGTGGAAATGGGAGGGATGATGGAGGATTTGGCAATCAATCCTTCTAA 444 0.4662 MAFCNKLGNLLRQGAAQNRQVPVASMLNYVRCMSSSKLFIGGLSYGVDDQSLRDAFASFGDVVEARVITDRDTGRSRGFGFVNFSSDDSASSALSAMDGQELNGRNIRVSYATDRPARPRSFGGGGGYGGGFGGNGRDDGGFGNQSF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00123 147 SUPERFAMILY RNA-binding domain, RBD 31 144 IPR035979 GO:0003676
Pral4561g00123 147 FunFam Glycine-rich RNA-binding protein 2 25 147 - -
Pral4561g00123 147 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Pral4561g00123 147 Gene3D - 17 146 IPR012677 -
Pral4561g00123 147 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Pral4561g00123 147 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 10 134 - -
Pral4561g00123 147 SMART rrm1_1 37 110 IPR000504 GO:0003723
Pral4561g00123 147 MobiDBLite consensus disorder prediction 115 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00123 Pral-Chr4561 564388 566540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00123 36 118 Eukaryotic Initiation Factors Gene Family AT1G49760 37.209 4.51e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00123 - - qsa:O6P43_023573 207.994