Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00116 ATGAGAATGTTGCCTGTTTGCTCAGCCACCCCAAGCTATTCATTGTCTTCCCAGATTCCATTGTATGGGGGATCTGTGTGTCCATTGCAGAAGGATTTTGAAGGTCGATGCACTGTGGATGATGTACATCTGGGTTTGCAAAATGGAACCCACTCCCTGAGGAATCCATATATTGCACAAGCTACAAAGTCTATCTACTCTAGCATTGCTAATAGTGCCGAACAATCGGTGTATGTGGAGTTCCCTGGCAGATTTTCCTGTCCAAATGAATCAGGACAACTTGAGTGCAAATTTACGAACACATGGAATTATTCACCAGTGACTGCAAGTGGACACCATTCTCTGACTAGTGGAGAGCTTATATATGTTGAAAATTATGATTCATCATCCGTCCAAGAGAGATTGATGGAAATAACTGAACAGTCAACTGAAGGATCAGAAACTTTATTAAGTACTGACATTGTGTCAGAGAAGCTCATACCTATGCCTGAATCAATTATAGTGGACAATGAATCATTAGGCAGCACAAAAGCAAGTATTGGTGATATTTTTTCTGGAATTAGCAAGTCATTTAATGCATCAATTGATGAGGGACAAAATGCTTTACAAAGTTCACTTGATACGGGCACTTCTTTGATGAGATCTATCATGGAGAATGCTACTAAGTCTGTAGACAATGCTTTTGGTGAAGCCTTTTCTTCTGTCAATCAAACAGGAGAATTAACTAATAAGAAATTGAGTAGCTTTTCAAGTGATCTAAGTGGAATCACAAGCAAAGTACCTGCTTTTGCTATTGACGTGTTGCGAAGCACAATCATAGTAGTGGAGAGTTCGTTAATAAATGGGGCTTCCTATGTTGTCTACCTATATGGTTCAGCCAAGGAGCTTCTTCCTGTAGGAATCAGGGATGCAGTAAATGCATACGAATCTAAAGCTTCTCAAATATTGAGGCCAATTGGGTCTGCATCTCAAGAGATATTCACAACAATTCATTCATTGGAGAAGAGTCTTGGCTTGGATCCAGATGATCCAGTTGTTCCATTTGTTGTTTTTGTGGGATCTTCAGCCACAATATGGGCTGTCTATCGGTTGTGGGCATATGGAGGTTACTCTGGAGATTTATCTCCTAAATCAGCTTTGGATCTCTTGTCTGGGAATGAAAATGCTGCACTTATAGACATTCGAAATGAGGATCTGAGAGAAAAAGATGGCATTCCTGATCTTCGACGGGCAGCACGGTTTCGCTATGCGAGTGTAACTCCACTAGAGGTCGATAGTTCTACTAGGAAGTTGTTCAAGAGTGAAAGAGACCTTAATGACTCCATGATCGCTGTTGTTATTCAAAATTTGAAGATTGTAAAGGACAGTTCCAAGGTTATAGTCATGGATGCTGATGGTAGTCATTCTAAAGGCATTGCAAGATCCTTGAGGAAAATAGGGGTCAAGACTCCATACTTGGTTCAAGGTGGTTTTCAGTCTTGGGTGAAACAAGGCCTCCGCGTCAAGGAACTCAAACCTGAGTCAACGCTTACCTTACTCAATGAGGAAGCTGAAGCAATTCTAGAGGAACTTAGCCCTTCTCCTTTGCAACTTTTAGGATATGGTGTGGCTGTTATTGCAGGCTTGTACGCATTATTAGAGTGGGAGAAGACATTACAGTTAATTGGTGTTTTTGGCCTCAGCCTGACAATCTATCAGAGAGTGACCTCATATGAAGATTCTGAAGATCTTAAGCAAGATGTCAGGTTGTTGCTTACACCTGTGAGGCTGGGAGTTCAAGCGGTTTCATGGATTTCTGGAAAAGTAGAAACGAACCGCATAGGGTTGCCTACTTCGCCTTCATCACTAGATGTTCAGAACCGAGTTTTGCAGGCGGCTGCAAAGCATGAATCTCAACCATCGGATTCTGGAAGTATCCAAGATCCATCTGTTCCTGAGCCATCACTTCCTCTCAATGAGAATGCATGA 1968 0.4172 MRMLPVCSATPSYSLSSQIPLYGGSVCPLQKDFEGRCTVDDVHLGLQNGTHSLRNPYIAQATKSIYSSIANSAEQSVYVEFPGRFSCPNESGQLECKFTNTWNYSPVTASGHHSLTSGELIYVENYDSSSVQERLMEITEQSTEGSETLLSTDIVSEKLIPMPESIIVDNESLGSTKASIGDIFSGISKSFNASIDEGQNALQSSLDTGTSLMRSIMENATKSVDNAFGEAFSSVNQTGELTNKKLSSFSSDLSGITSKVPAFAIDVLRSTIIVVESSLINGASYVVYLYGSAKELLPVGIRDAVNAYESKASQILRPIGSASQEIFTTIHSLEKSLGLDPDDPVVPFVVFVGSSATIWAVYRLWAYGGYSGDLSPKSALDLLSGNENAALIDIRNEDLREKDGIPDLRRAARFRYASVTPLEVDSSTRKLFKSERDLNDSMIAVVIQNLKIVKDSSKVIVMDADGSHSKGIARSLRKIGVKTPYLVQGGFQSWVKQGLRVKELKPESTLTLLNEEAEAILEELSPSPLQLLGYGVAVIAGLYALLEWEKTLQLIGVFGLSLTIYQRVTSYEDSEDLKQDVRLLLTPVRLGVQAVSWISGKVETNRIGLPTSPSSLDVQNRVLQAAAKHESQPSDSGSIQDPSVPEPSLPLNENA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00116 655 Gene3D - 370 510 IPR036873 -
Pral4561g00116 655 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 364 502 IPR036873 -
Pral4561g00116 655 CDD RHOD 380 495 - -
Pral4561g00116 655 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 643 IPR044690 GO:0009704|GO:0071277|GO:0090333
Pral4561g00116 655 SMART rhod_4 375 500 IPR001763 -
Pral4561g00116 655 Pfam Rhodanese-like domain 376 496 IPR001763 -
Pral4561g00116 655 ProSiteProfiles Rhodanese domain profile. 385 503 IPR001763 -
Pral4561g00116 655 MobiDBLite consensus disorder prediction 625 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00116 Pral-Chr4561 523042 530052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00116 310 464 Sulfurtransferasese or Rhodanese AT5G23060 28.834 6.30e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00116 - - pcin:129309432 1105.89