Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00115 ATGCGGTGCCATGTCGTGACTATTCCCGGAAGCGATTACCGCTTCTTCTCCCCAGCACCTGTATCTGTCCCCTCCAACACCACTTCCAATCACAAATCTCTCAGTTTCCCCTTTCGAACCGGCGGTTTTGGCTCTCTGAGAGTTAAAGCCGCTGTGAACGACGGCTATGTGGCCGAGGCCTCCAAGGCCTCCAAGTTGAGCTTCTACGAGCTTCTGGGTATTCCCGAATCTGGGTCCTTGCTTGAGATCAAGCAGGCGTACAAGCAGCTCGCGCTCAAGTACCACCCTGATGTGTCGCCGCCAGATCGGGTGGAGGAGAATACGAAGAGGTTCATTCAGGTGCAGGAGGCCTATGAGACCTTGTCTGATCCTAGAAGGAGAGCTATGTATGATAGAGACATGGCCAGAGGGATCCACTTGGCCTTCTCCGCTCGCCGGTGCTACTACGACGGCGAGGTAATCGAACAGAGAAGTGAGTGGAAAGCCCGTTGGCAAAGTCAGCTATCAGAGCTGAATCGAAGAAGCAAGCTCAAGGAAAATGAAGAAAATATGTCGTGGGCCGCTCGAATGCGTCGTCGAAGGGCAGAATCGTGTAACGAATCATAA 606 0.5314 MRCHVVTIPGSDYRFFSPAPVSVPSNTTSNHKSLSFPFRTGGFGSLRVKAAVNDGYVAEASKASKLSFYELLGIPESGSLLEIKQAYKQLALKYHPDVSPPDRVEENTKRFIQVQEAYETLSDPRRRAMYDRDMARGIHLAFSARRCYYDGEVIEQRSEWKARWQSQLSELNRRSKLKENEENMSWAARMRRRRAESCNES 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00115 201 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 51 197 - -
Pral4561g00115 201 CDD DnaJ 68 123 IPR001623 -
Pral4561g00115 201 ProSiteProfiles dnaJ domain profile. 67 134 IPR001623 -
Pral4561g00115 201 SMART dnaj_3 66 126 IPR001623 -
Pral4561g00115 201 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Pral4561g00115 201 Gene3D DnaJ domain 53 150 IPR036869 -
Pral4561g00115 201 MobiDBLite consensus disorder prediction 179 201 - -
Pral4561g00115 201 SUPERFAMILY Chaperone J-domain 63 139 IPR036869 -
Pral4561g00115 201 Pfam DnaJ domain 68 131 IPR001623 -
Pral4561g00115 201 FunFam Chaperone protein dnaJ 20, chloroplastic 52 162 - -
Pral4561g00115 201 Coils Coil 161 181 - -
Pral4561g00115 201 PRINTS DnaJ domain signature 126 145 IPR001623 -
Pral4561g00115 201 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pral4561g00115 201 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pral4561g00115 201 PRINTS DnaJ domain signature 106 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00115 Pral-Chr4561 515648 517632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00115 57 131 C2H2 Transcription Factor Family AT1G74250 42.308 6.60e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00115 - - zju:107422310 238.81