Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00068 ATGGTAGAGAGCAATGTTCAGCCTGTAAAAAGTCCTGTTACAATTTGTGGTGATATTCATGGGCAATTCCATGATCTTGCTGAGCTTTTTCGCATTGGAGGCAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTATGTTGATCGTGGCTATTATTCAGTTGAAACCGTAACACTTTTGGTTGCTCTCAAAGTGCGCTATCCTCTACGCATTACTATTCTCAGGGGAAATCATGAAAGTCGTCAGATTACTCAAGTTTATGGGTTTTACGATGAGTGCCTACGAAAGTATGGTAATGCCAATGTTTGGAAGATCTTTACAGATTTATTTGACTACTTCCCCTTGACAGCATTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGGTTGTCCCCATCAATTGAAACCCTTGACAACATTCGTAATTTTGATCGGGTACAAGAAGTTCCTCATGAAGGACCCATGTGTGATCTTCTGTGGTCTGATCCCGATGATCGCTGTGGTTGGGGTATCTCTCCTAGAGGTGCAGGATATACCTTTGGCCAGGACATATCTGAGCAGTTCAACCACACCAATAACTTGAAGCTTATCGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCATGATCAAAAGGTGGTTACCATATTTAGTGCACCTAATTACTGTTACCGCTGTGGGAATATGGCATCTATCCTTGAAGTTGACGACTGCAAGGGACACACATTCATTCAGTTTGAGCCAGCGCCAAGGAGGGGAGAGCCAGATGTGACCAGGAGAACACCTGATTACTTCCTATGA 813 0.4293 MVESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPLRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00068 270 ProSitePatterns Serine/threonine specific protein phosphatases signature. 75 80 IPR006186 GO:0016787
Pral4561g00068 270 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 270 IPR047129 GO:0004722
Pral4561g00068 270 Pfam Calcineurin-like phosphoesterase 12 203 IPR004843 GO:0016787
Pral4561g00068 270 SUPERFAMILY Metallo-dependent phosphatases 2 255 IPR029052 -
Pral4561g00068 270 SMART pp2a_7 1 254 IPR006186 GO:0016787
Pral4561g00068 270 CDD MPP_PP2A_PP4_PP6 3 254 - -
Pral4561g00068 270 Gene3D - 1 270 IPR029052 -
Pral4561g00068 270 FunFam Serine/threonine-protein phosphatase 1 270 - -
Pral4561g00068 270 PRINTS Serine/threonine phosphatase family signature 41 68 IPR006186 GO:0016787
Pral4561g00068 270 PRINTS Serine/threonine phosphatase family signature 194 214 IPR006186 GO:0016787
Pral4561g00068 270 PRINTS Serine/threonine phosphatase family signature 138 165 IPR006186 GO:0016787
Pral4561g00068 270 PRINTS Serine/threonine phosphatase family signature 109 135 IPR006186 GO:0016787
Pral4561g00068 270 PRINTS Serine/threonine phosphatase family signature 12 39 IPR006186 GO:0016787
Pral4561g00068 270 PRINTS Serine/threonine phosphatase family signature 74 98 IPR006186 GO:0016787
Pral4561g00068 270 PRINTS Serine/threonine phosphatase family signature 216 232 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00068 Pral-Chr4561 325995 335889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00068 11 200 Calmodulin-binding Proteins AT5G63870 35.683 6.83e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00068 K04382 - mus:103983011 572.392