Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00066 ATGTACGCTTCTTCTTCATCTACAGAAGCAGAAGCTGAAGCTGAAGCTGAGAAGAACATCTACAAATACATATTCGGCTTCGTTGAGATGGCAGTCGTAAAATGCGCCATCGAACTCAACATAGCAGAAGCCATTGAAAGCCACCACACTTGCCTCACCCTTTCCCAACTCTCGTCAGCTGTCAACTGCGACCCCTCCATGCTGCACCGCATCATGCGCTTCCTCACTCGCCGGAACATCTTCAAACAAGTCTCCACCACCCGCGACGGCGCCCAGCCTGAGCCCGCCTACGTGAACACCCCTCTCTCGCGGCTCCTGATAAAGAAAAGCGAAGCCAGCATGGCGGCTTTCGTGATGCTGGAGTGCAGCCCCGTGATGCTGGCGCCGTGGCAGAACTTAAGCGGCAGGGTTCGGGCCAACGGGACGTCGTCGTTCGAGAAGGCTCACGGGAAGGATGTGTGGGGCTACGCGGAGGCGAATGCGGAGCACAGAGAGCTGATAAATGAGGCGATGGCGTGCGATGCTCGGAGAGGGATGAGGGAGATAGTGGAGCACTGCCGGGAGGCGTTCGAGGGGGTGAGGTCGGTGGTGGACGTGGGCGGAGGGAACGGAACCGCCATGAGGATGTTGGTGAGAGCGTGTCCCTGGCTGCGAGGCATCAACTTCGACCTTCCACACGTAGCAGCGGCGGCTCCCAACTGCGACGGCGTGGAACACGTGGGAGGAGACATGTTTGTGAGCGTTCCCAAAGCAGACGCTGCATTTCTCATGTGGGTACTGCATGACTGGGGGGACGAGGAATGCATAGAGATCCTGAAGAAGTGCAGGGAAGCGGTAGGAGAGAAGGGGAAGGTGATGATAGCGGAGGCAGTGATAGAAGAAGCAGGCGAGAAGGAGAAACTGAAGGAGGTGGGGCTGATGCTGGACATGGTGATGATGGCTCACACCAGCGTCGGCAAAGAGAGGACTGTGAGCGAGTGGGAGTATGTGATCAGGGAGGCCGGATTCTCCGCCTTCTCCGTCCGCCACATCCCTTCTTCTGTCAAGTCCCTCATCATGGCCTTCCCTTGA 1071 0.577 MYASSSSTEAEAEAEAEKNIYKYIFGFVEMAVVKCAIELNIAEAIESHHTCLTLSQLSSAVNCDPSMLHRIMRFLTRRNIFKQVSTTRDGAQPEPAYVNTPLSRLLIKKSEASMAAFVMLECSPVMLAPWQNLSGRVRANGTSSFEKAHGKDVWGYAEANAEHRELINEAMACDARRGMREIVEHCREAFEGVRSVVDVGGGNGTAMRMLVRACPWLRGINFDLPHVAAAAPNCDGVEHVGGDMFVSVPKADAAFLMWVLHDWGDEECIEILKKCREAVGEKGKVMIAEAVIEEAGEKEKLKEVGLMLDMVMMAHTSVGKERTVSEWEYVIREAGFSAFSVRHIPSSVKSLIMAFP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00066 356 Pfam O-methyltransferase domain 130 337 IPR001077 GO:0008171
Pral4561g00066 356 Pfam Dimerisation domain 32 76 IPR012967 GO:0046983
Pral4561g00066 356 CDD AdoMet_MTases 196 287 - -
Pral4561g00066 356 FunFam O-methyltransferase family protein 4 106 - -
Pral4561g00066 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Pral4561g00066 356 Gene3D - 6 106 IPR036388 -
Pral4561g00066 356 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Pral4561g00066 356 FunFam O-methyltransferase family protein 108 355 - -
Pral4561g00066 356 SUPERFAMILY "Winged helix" DNA-binding domain 13 109 IPR036390 -
Pral4561g00066 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Pral4561g00066 356 PANTHER O-METHYLTRANSFERASE 30 336 IPR016461 GO:0008168
Pral4561g00066 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 356 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00066 Pral-Chr4561 315080 316588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00066 33 341 Monolignol Biosynthesis Gene Families AT5G54160 35.669 9.24e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00066 K22588 - mnt:21384756 437.958