Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00058 ATGAGAGGAAGGAGCTATAGTCCATCGCCGCCCAGGGGTTATGGCAGAAGGGGAAGAAGTCCTAGCCCAAGAGGTCGTTATGCCGGCCGTGGCAGAGATCTTCCCACCAGTCTTCTGGTTCGCAACCTTCGCCACGACTGCAGGCCTGAGGATCTTCGTAGACTTTTTGGACAATTTGGTGCTCTTAAGGACATTTACCTCCCGAAAGATTATTATACTGGAGAACCCCGAGGCTTTGGTTTTATCCAATATGTAGATCCTGCTGATGCGGCAGATGCAAAATATCATGTGGATGGTCAAATTCTTCTTGGTCGAGAGTTGACCGTTGTTTTTGCTGAGGAGAACAGAAAGAAGCCTGCTGACATGAGAGCAAGAGAAAGAAGGGGTCGATTTTCTGATCGAAGAAGGTCTCCACCTCGTTATTCTCGCTCTCCTCAATACTCTAGGTCACCCCCACGTCATAGATCTCGGTCTCGAAGCCGTGATTATTATTCTTCCCCTCCTAAACGAAGGGAGTATTCAAGATCTGTGTCACCTGAAGATAGAAGATACAGTCGAGAAAAAGAGAGAGGGAGATCATACTCGCGACAGAGCAGGGAGAGGTCATACTCACGCTCTCCACCCAATAATGGTGGCGCAAGGAGTCGGAGTCGGACTCAGAGTCCAGCTAAGGACCCAAGCCGGAGCCGCAGTCAGACTCCAAATGGTGATGATTATCCAAGGGAGCCGGCCCGCGGTAGGTCCCCCAGTCAATGA 756 0.5053 MRGRSYSPSPPRGYGRRGRSPSPRGRYAGRGRDLPTSLLVRNLRHDCRPEDLRRLFGQFGALKDIYLPKDYYTGEPRGFGFIQYVDPADAADAKYHVDGQILLGRELTVVFAEENRKKPADMRARERRGRFSDRRRSPPRYSRSPQYSRSPPRHRSRSRSRDYYSSPPKRREYSRSVSPEDRRYSREKERGRSYSRQSRERSYSRSPPNNGGARSRSRTQSPAKDPSRSRSQTPNGDDYPREPARGRSPSQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00058 251 Gene3D - 28 145 IPR012677 -
Pral4561g00058 251 MobiDBLite consensus disorder prediction 200 236 - -
Pral4561g00058 251 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Pral4561g00058 251 MobiDBLite consensus disorder prediction 118 251 - -
Pral4561g00058 251 MobiDBLite consensus disorder prediction 1 32 - -
Pral4561g00058 251 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Pral4561g00058 251 MobiDBLite consensus disorder prediction 118 140 - -
Pral4561g00058 251 SUPERFAMILY RNA-binding domain, RBD 36 141 IPR035979 GO:0003676
Pral4561g00058 251 MobiDBLite consensus disorder prediction 157 199 - -
Pral4561g00058 251 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 35 230 - -
Pral4561g00058 251 SMART rrm1_1 37 110 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00058 Pral-Chr4561 271852 276394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4561g00058 26 164 Eukaryotic Initiation Factors Gene Family AT3G16380 27.338 7.69e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00058 K12900 - qsa:O6P43_003831 283.878