Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4561g00004 ATGGAAGAAGTTTCTTTAAATAGTGAGCCAATGTTTGATGAATGTGATGAGTTTGATGTTGAGAACTCTTCTGCATCAGAGCATGATCATGAGTCTTTGGACTCAAGATCAAAGAACCATCCACCTCCAACTGTGGGCCTGGAGTTTGATTCTTTTGAAGAAGCTTACAACTTTTACAATGTTTATGCTAAAGAACAAGGTTTTGGCATTAGAGTGAGCAACTCATGGTTTAGATCAAGGAGGAAGGAGCGGTATAGGGCAAAACTCAGCTGCAGTAATGCTGGTTTCAAGAAAAAGAGTGAAGCCCATAATCCAAGACCAGAGACAAGAACTGGTTGCCCTGCAATGATAGTCATTAGGATGGTGGATGGCCAAATATGGAGGATAGTGGAAGTTAAACTGCAACACAACCATCAAGTGAATCCTGGAATTAAACGGTTCTATAAGTCCCATAAGAAAATGATACTTGCAGCCAGAGAAGCACAACCACCACCAGATCCTATTACAGAAACACATACCATTAAATTGTATCGAACAGCTCTCATGGATGCTGGTTATAATGGGTTCTCCAATTTTGTTGAAGGACAGGGGACCAGCTTTGATAATTTGAAATATTTGGAACTTAAAGAAGGGGATGGCCATACTATTTATAATTATTTTTGCCGAATGAAATTGACAAACCCGAATTCCTTTTACTTATTCGATATTGATGATGATGGGCAGCTAAGAAATGTGTTTTGGGTTGATGCCAGGTCGAGGGTATGTTACAGTTACTTTAATGACACTGTTATTATAGATACAACTTGTTTGGCAAACAAATATGAGATCCCTCTGATATCATTTGTTGGTGTAAACAACCATGGACAGTCGGTGCTACTGGGCTGTGGCTTCCTTGGGTATGAAAAAGTTGATAATTTTGTTTGGATATTTAATGCATGGCTAAAATGTATGCTTGGTTGCCCACCACATGTTGTTATTACTGATCAGTGCGAGCGCTTGCAAACTGCAGTTGCTCAGGTTTTTCCTCATGCTCATCATTGTTATTCTTTGCAGTATATCATGCAGAGAGTTCCAGAAAAGTTGGGAGGGTTGAAGGGATATGAAACAATCAAAAGGCAATTGAACAGAGCAGTTTATGAGTCCCTAAAGATAGTCGAGTTTGAAAATTATTGGGCTGATATGATCAAGCAGCATGGATTGGGAGATAACAAATGGCTTCAAAGATTGTATGACGATAGGCACCTGTGGGTTCCGGTTTACATCAAGGACACTTTTTTGGCAGGAATGGTCCCTACAAAAGAGAATGAGGGCCTGATTGCCTATTTTGACGGATATGTACACAAGCATACATCCTTCAAGGAATTTATTGACAAGTATGACTTAGCTTTACATAGGAAGAACTTGAAAGAAGCCATGGCAGAGTTGGAGTCAAGGAAATCAAGTGTTGTATTGACTACAAGATGTAATTTTGAACTGCAGCTATCCAAGTTGTACACAGAAGAAATCTTTAAAAAGTTCCAGTCTGAGGTTGAGGGTATGTACTCCTGCTTCAATACAAGACAGGTAAATGCTAATGGATCTATAATAACATATATAGTGATAGAACGAGTTGAAAATGGGGGAAATGAGAAGGAGGTTAAGAAATTTGAAGTCTTATATGAGACAAATGAAGTAGACATACGGTGTATCTGCGGCTTGTTCAATTTCAAAGGTTATCTATGTAGGCATGCACTGAATGTTCTGAATTATAATGGTGTGGAGGAAGTCCCATCTCGGTACATTCTGGAACGATGGAAGAAAGATTTCAAACAACGGTTTATTGGAGACCATGTCTTTGGTGACGCTGATACATACAACGCCGTTGTCTGGCATAAACAACTATTTTATAATGCTCTTCCATTGCTAGAAGAAGGGGCTCAGTCCCAAGAGCATTACATGATTGCTTTACTAGAACTGGAACAGTTGTTAAACAAGTTTGATCTATTGGAAGATAACTCATTGTAA 2004 0.3907 MEEVSLNSEPMFDECDEFDVENSSASEHDHESLDSRSKNHPPPTVGLEFDSFEEAYNFYNVYAKEQGFGIRVSNSWFRSRRKERYRAKLSCSNAGFKKKSEAHNPRPETRTGCPAMIVIRMVDGQIWRIVEVKLQHNHQVNPGIKRFYKSHKKMILAAREAQPPPDPITETHTIKLYRTALMDAGYNGFSNFVEGQGTSFDNLKYLELKEGDGHTIYNYFCRMKLTNPNSFYLFDIDDDGQLRNVFWVDARSRVCYSYFNDTVIIDTTCLANKYEIPLISFVGVNNHGQSVLLGCGFLGYEKVDNFVWIFNAWLKCMLGCPPHVVITDQCERLQTAVAQVFPHAHHCYSLQYIMQRVPEKLGGLKGYETIKRQLNRAVYESLKIVEFENYWADMIKQHGLGDNKWLQRLYDDRHLWVPVYIKDTFLAGMVPTKENEGLIAYFDGYVHKHTSFKEFIDKYDLALHRKNLKEAMAELESRKSSVVLTTRCNFELQLSKLYTEEIFKKFQSEVEGMYSCFNTRQVNANGSIITYIVIERVENGGNEKEVKKFEVLYETNEVDIRCICGLFNFKGYLCRHALNVLNYNGVEEVPSRYILERWKKDFKQRFIGDHVFGDADTYNAVVWHKQLFYNALPLLEEGAQSQEHYMIALLELEQLLNKFDLLEDNSL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4561g00004 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 658 IPR031052 GO:0006355
Pral4561g00004 667 MobiDBLite consensus disorder prediction 21 37 - -
Pral4561g00004 667 MobiDBLite consensus disorder prediction 1 20 - -
Pral4561g00004 667 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Pral4561g00004 667 SMART 26again6 560 587 IPR006564 GO:0008270
Pral4561g00004 667 Coils Coil 645 665 - -
Pral4561g00004 667 MobiDBLite consensus disorder prediction 1 44 - -
Pral4561g00004 667 Pfam FAR1 DNA-binding domain 57 142 IPR004330 -
Pral4561g00004 667 Pfam MULE transposase domain 263 355 IPR018289 -
Pral4561g00004 667 Pfam SWIM zinc finger 551 582 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4561g00004 Pral-Chr4561 6040 11622 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral4561g00004 MULE 9.8e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4561g00004 K17604 - gmx:100811666 1076.23