Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4548g00049 ATGGCCGGAGCACAAGCTTTTGAGTTTGAGCATCCCAGGAAGGCCTTCGGATGGGCTGCTAGGGATTCTTCTGGCCTTCTCTCTCCTTTCAACTTCTCTCGAAGAGAAACCGGAGACAAAGATGTGACTTTCAAAGTCCTTTACTGTGGAATATGCCATTCCGACCTCCACATGCTCAAGAACGAATGGGACTTCTCCGTCTATCCACTCGTACCTGGGCATGAGATTGTTGGGGTGGTGACGGAAGTTGGAAGCAAGGTGGAAAAGTTCAGAGTTGGAGACAGAGTCGGTGTGGGATGTTTGGTTGGTTCGTGCAGATCCTGTGGAAGTTGTTCTGACGATCTTGAGAATCACTGTTCAAAGCAAATTCTCACATATGGAGCCAAGTACGTGGATGGGACTATCACATACGGAGGTTACTCTGATTTTATGGTTGCAGATGAGCATTTTGTGGTTCGCATTCCAGATGCTTTGCCTCTTGATTCTGCAGGTCCTCTGCTTTGTGCCGGGATCACTGTGTATAGCCCTTTGAGGTATTTTGGTCTGGACAAGCCTAACCTTCACGTGGGTGTGGTTGGTCTCGGTGGGCTTGGCCATATGGCTGTCAAGTTTGCCAAAGCCTTTGGAGCTAAGGTCACTGTCATAAGCACTTCTCCTAACAAGAAGAAGGAAGCCATTGAACATCTTGGAGCTGATTCCTTTATTGTCGGCCGTGAGCAAGATCAGATGCAGGCTGCGATGGGCACATTTGATGGCATAATAGACACAGTTTCTGCAGTGCATGCTCTTTTGCCTTTGATTGGTCTTTTGAAGCCGAATGGCAAACTGGTGTTGGTTGGTGCGCCTGAGAGGCCTCTGGAATTGCCAGTATTTCCTTTACTTTCGGGGAGGAAGATAGTGGCCGGAAGTGGAATTGGAGGGATGAAGGAGACGCAAGAGATGGTAGATTTTGCAGCCAAGCATAACGTGAGACCAGACATAGAAGTGATTCCAATGGATTATGTGAACACTGCAATGCAGCGACTCCTTAAAGCTGATGTCAAGTATCGTTTTGTGATTGACATTGGCAACACAATGATGAAGCCAACCTCTTAG 1095 0.4776 MAGAQAFEFEHPRKAFGWAARDSSGLLSPFNFSRRETGDKDVTFKVLYCGICHSDLHMLKNEWDFSVYPLVPGHEIVGVVTEVGSKVEKFRVGDRVGVGCLVGSCRSCGSCSDDLENHCSKQILTYGAKYVDGTITYGGYSDFMVADEHFVVRIPDALPLDSAGPLLCAGITVYSPLRYFGLDKPNLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFIVGREQDQMQAAMGTFDGIIDTVSAVHALLPLIGLLKPNGKLVLVGAPERPLELPVFPLLSGRKIVAGSGIGGMKETQEMVDFAAKHNVRPDIEVIPMDYVNTAMQRLLKADVKYRFVIDIGNTMMKPTS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4548g00049 364 Gene3D - 18 355 - -
Pral4548g00049 364 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Pral4548g00049 364 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
Pral4548g00049 364 SUPERFAMILY GroES-like 11 201 IPR011032 -
Pral4548g00049 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Pral4548g00049 364 PANTHER ALDEHYDE REDUCTASE 9 359 IPR047109 GO:0016616
Pral4548g00049 364 FunFam Uncharacterized protein 18 168 - -
Pral4548g00049 364 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Pral4548g00049 364 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Pral4548g00049 364 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Pral4548g00049 364 Gene3D - 169 325 - -
Pral4548g00049 364 CDD CAD1 16 354 IPR047109 GO:0016616
Pral4548g00049 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4548g00049 Pral-Chr4548 259073 260839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4548g00049 13 363 Monolignol Biosynthesis Gene Families AT4G37990 70.940 3.05e-172 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4548g00049 K23232 - mnt:21385909 591.652