Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4548g00025 ATGGCTCTCCTGGAAAACTCATTCATATATCTTCACTTTCTCATCCTCCAAATAATCGTATCTTGCGTGTTACTGTGTGGAAATATCAGTGTGATTGCTGAAACCAACACCCTGAATCAAACAGACACACTCAACTTCACAGCTCGTTTGGTTTCCAACAACAAGAACTTCACCTTAGGATTCATCAAACCTGTCACCTATATCAACAACACTTACTTAGCCATCTGGAATTCCAAGTACAGGTCAGCTTCTTCTCCAGTTTGGATCGCCAATAGAGACACCCCAATCGCTAATGGATCTGATGCAACTCTCTTCATCGACAAAAATGGGAAGTTTGTGATCAATCGAACTCATGGCCACCCAATTCAACTATGCCCTGGTGAAACCACGACCGACAACACCACCAACACAAGAGCTGTTTTGCTGGACAATGGAAATCTCGTACTGACAGAAGTGAATTCCGATGGATCTGTCGGTCGGACCTTGTGGCAAAGCTTTGATTGTCCCACGGACACTCTTTTGCCTGGCATGAAACTAGGCGTCAATCACAGAACAGGAAGGAATTGGACTCTCACATCATGGCTGGCTTCTAACGACCCATCTCCAGGAGCTTTTACCCTCGAATGGGACCCTCATGGCTTAGAGTTGGTTCTTCGACGTAGAGGGGCTGTGTTTTGGACTAGTGGGGCCTTGAAAAATCTCAGTGATCCTGATGGTGGAATGACCTTTGGGAACATAGGACCAACCTACTATTATACACAATCTTATAAGATGATGTACACGAGAACTTCAAATGAAGAGTTCTTCAACTATACGTTGAAAGATGACCGTTTGGATCCTGTGGTTCATGAAAGCATAGATTGGAGCATAGATTACAAAGGTAGCTTTTGGTTTGAGAACACGGGAGTCCCATTACAGGAATACTGTTATGGGTACAAGACAAAGGACAACGAGGGATGTGCAGAATGGGAACAACCACAATGTAGGAGTTACAATACGACGTTTCGGTTGTTGTCTGGGTACTTTGTGAATAAAAGCAATGGAAACTTCATTGATGGTGATCTTCACAGGATCGGTCCAGCTGATTGTAGAGTTAGTTGCTGGGATGATTGCGAATGTCTGGCATATCAGAAGATGGACACGTTGCGTTGTGTTCAATATCATCAAGAAGCAGAGTTTCGACCAGATCCATCGGGGAATTCGGAACAATTTTACGTTATCCAACAACCAGAAAATGGTTTAACAGAAGAAAGGAACAAGAAAAGGATTGCAATTTCGGTTCCCCTCGCAATATTATTCTTGTTAGCGTCTGTCATTGTTATTATCTTTTACTGGAGATGGAGAACGAAAGGGAGAAAAAGGGACCATCTACGTCAACTGTTGTCAGAAACTAAAAATTTACGCAATTTAGATGAGCTTGGATATGATAATGGTTTTGCTCAACATTTGAAAGTGTTCAGCTTTTTGTCTATCGCTGAAGCTACGGATAACTTCTCAGCTCAAAATAAACTTGGACAAGGCGGTTTTGGCCCAGTTTATAAGGGAAAACTACCTGAAGGGGAAGAAATTGCAGTAAAGATGTTATCAAGAAGTTCAGGACAAGGATTAGTGGAGTTTAAGAATGAGTTAATACTCATAGCAAAGCTACAGCACATGAATCTAGTTCGTTTGCTTGGATGCTGCATACAAGCTGAGGAGAAGATTTTGGTTTATGAATACATGGCTAACAAAAGTTTGGATTCCTTTCTCTTCGATGCATTGAAGAGGGATGCGTTAAATTGGAGAATACGAGTGATAATAATTGAAGGGATTTCACAAGGACTTCTTTACCTTCATCAGCATTCAAGGTTAAGGATCATTCACAGGGATTTGAAAGCTAGTAACATACTACTGGATGCGGATATGAATCCTAAAATTTCTGATTTTGGAATGGCAAGAATTTTCAAACGGGATGAACTCATTGCCAACACTAACAGGATTGTTGGGACATATGGCTACATGTCACCAGAGTATGCAATGGATGGAGTGGTCTCCATAAAATCAGACATATTCAGTTTTGGGGTCATAATTCTTGAAATTTTAAGTGGCAAGAGAAACAACGGCTTTTATAACGTTAACAAACCTCTCAGTTTAGTAAAATATGCTTGGGATTTGTGGCGAAATGGAGTTGGCTTAGAGCTAATGGATCCAACATTAAGTGACTCATGTTCCAATCAGCAATTTCTCAGATTTATTCACATAGGTCTTTTGTGCGTGGAAGAATCTCCAGTAGATAGACCAACTACTTCAGAAGTCGTTTCTATGATCCAAAATGAAAGTACCATCTTGCCTGTGGTGAAGAAACCTGCATTTACAAATTTAGACAATGTCACCGAAGTAGATTCTCATATGGATGACTCAGCATCTCATTCTGTCAACAATGTGTCAATATCTACTATAAATGGAAGATAG 2451 0.408 MALLENSFIYLHFLILQIIVSCVLLCGNISVIAETNTLNQTDTLNFTARLVSNNKNFTLGFIKPVTYINNTYLAIWNSKYRSASSPVWIANRDTPIANGSDATLFIDKNGKFVINRTHGHPIQLCPGETTTDNTTNTRAVLLDNGNLVLTEVNSDGSVGRTLWQSFDCPTDTLLPGMKLGVNHRTGRNWTLTSWLASNDPSPGAFTLEWDPHGLELVLRRRGAVFWTSGALKNLSDPDGGMTFGNIGPTYYYTQSYKMMYTRTSNEEFFNYTLKDDRLDPVVHESIDWSIDYKGSFWFENTGVPLQEYCYGYKTKDNEGCAEWEQPQCRSYNTTFRLLSGYFVNKSNGNFIDGDLHRIGPADCRVSCWDDCECLAYQKMDTLRCVQYHQEAEFRPDPSGNSEQFYVIQQPENGLTEERNKKRIAISVPLAILFLLASVIVIIFYWRWRTKGRKRDHLRQLLSETKNLRNLDELGYDNGFAQHLKVFSFLSIAEATDNFSAQNKLGQGGFGPVYKGKLPEGEEIAVKMLSRSSGQGLVEFKNELILIAKLQHMNLVRLLGCCIQAEEKILVYEYMANKSLDSFLFDALKRDALNWRIRVIIIEGISQGLLYLHQHSRLRIIHRDLKASNILLDADMNPKISDFGMARIFKRDELIANTNRIVGTYGYMSPEYAMDGVVSIKSDIFSFGVIILEILSGKRNNGFYNVNKPLSLVKYAWDLWRNGVGLELMDPTLSDSCSNQQFLRFIHIGLLCVEESPVDRPTTSEVVSMIQNESTILPVVKKPAFTNLDNVTEVDSHMDDSASHSVNNVSISTINGR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4548g00025 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 133 794 - -
Pral4548g00025 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 200 IPR036426 -
Pral4548g00025 816 Gene3D Transferase(Phosphotransferase) domain 1 574 780 - -
Pral4548g00025 816 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4548g00025 816 PIRSF SRK 311 816 IPR024171 GO:0004674
Pral4548g00025 816 PIRSF SRK 6 314 IPR024171 GO:0004674
Pral4548g00025 816 Gene3D - 30 167 IPR036426 -
Pral4548g00025 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 464 573 - -
Pral4548g00025 816 SUPERFAMILY Protein kinase-like (PK-like) 480 790 IPR011009 -
Pral4548g00025 816 Pfam Protein tyrosine and serine/threonine kinase 500 706 IPR001245 GO:0004672|GO:0006468
Pral4548g00025 816 Pfam D-mannose binding lectin 86 194 IPR001480 -
Pral4548g00025 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Pral4548g00025 816 ProSiteProfiles Bulb-type lectin domain profile. 35 162 IPR001480 -
Pral4548g00025 816 CDD STKc_IRAK 504 771 - -
Pral4548g00025 816 SMART blect_4 35 169 IPR001480 -
Pral4548g00025 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Pral4548g00025 816 SMART serkin_6 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4548g00025 816 Gene3D Phosphorylase Kinase; domain 1 475 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4548g00025 Pral-Chr4548 118407 122282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4548g00025 465 816 Receptor kinase-like Gene Family AT4G11530 54.596 6.56e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4548g00025 PK_Tyr_Ser-Thr 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4548g00025 - - pcin:129322789 1330.85