Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4548g00017 ATGGCTGAGGCTATCCTGGAGGTTGTGCTTGAGAATTTGAGCAAGTTCCTTGAGAATGAGCTTGGCCTTTTTCTGGGTGTCAATCAAGAGATGAGAAGACTCAGTGGCACACTTTCAACTATCCGGGCTGTGCTTGAAGATGCCGAGGAAAAGCAAGTCACTGACATGGCTATAAGAAATTGGCTGCAAAAGCTGAAAAATGCGGCTCACTTTCTGGATGACATATTGGACGAGTGTGCAACAGAAGGACTTCGATTTCAGTATGAAAGACAAAGTTGTAGATCAACAAACAGGGTAAGACATTCTTTCTTATCCTCATTGCATCCAGTGAGCATTCTTTTCCGCTACAAAATTGCTAGGAAAATGAAAAATATAAGGGTGTTGTTGGATGAAATTGCTGATGAAAAGCGCAAGTTTCATTTTTGTGAGACAGTTATCCCGAGGAAAAATGAAGTGATGGAATGGCGTCAAACCGGTCCAGTTATTTCTCAACCTCAGCTCTATGGAAGAGAAGGAGATAAGGAAAGAGTTGTGGATTTTTTGGTCAGTCAGGCCTCAAGCTCTGATGGTTTATCAGTGTATCCCATAGTTGGGATGGGTGGACTGGGAAAAACAACTCTGGCACAACTTGTGTTCAATGATGAGAAGATAACGAAACATTTTCAGTTGAAGATCTGGGTATGCGTTTCACAGAATTTTGATGTTAAGAAAATGTTAAAAGCTATCATGGAATCAGCCACTGGGCATAGCTGTGAGTCGCTGGATTTAGATCCCCTGCAGAGAAAAATTCAAGAGACTCTTCAAAGAAAAAGATCCTTAATTGTTTTGGATGATGTGTGGAATGATGACCCAGAGAAATGGGATAGGCTGAAATGCGTCCTGTCTTGTGGATCAAGAGGTTCCTCCATTATTGTCACAACTCGGCTAGCAAGGGTAGCATCCATCATGGAAACCCAGACTTCTCATCAGTTATCTGGCTTATCCATTGGTGATTGCTGGGAATTGTTCAAGCAACGTGCCTTTGGACCAGACAAGAAAGAACATGCACAGCTAGCGGACATAGGAAAGGAGATAGTGAAAAAGTGTGGTGGTGTGCCTCTTGCTGCAAAAGCATTAGGAGGCCTCTTACGCTTCACAAGGGAGGAGATCGTGTGGCTCAATGTCAAGGAAAGCAAATTGTGGAATCTGCCGCAGGATGAAAACTCCATCTTATCTGCCTTGAGATTAAGCTATTGGAACTTGCCATTCAAAGTAAGACCTTGCTTTGCCTATTGCGCCATTTTCCCCAAAGGTAAAGAAATTAACAAGCATTTGCTAATTCAACTTTGGTTGGCTAATGGGTTCATAACACCCCACGGAAAATTGGATGTAGAAGATGTGGGCAATGAGATGTGGAAAGAATTGTATTGGAGATCATTTTTCCAAGATATTCAGACAGATGAATTTGGTATCGTTGCAAGTTTCAAGATGCATGATCTGGTTCATGATCTTGCGCAATCAGTCATGAGAGAAGAATGTCATATTCTGGACAACACATGCTCTGGTGATTTGTCAGAAAAAACTCGCCATCTCTCTGCTCCTATCTATCGACTGAGAAGATCTCATTTCGGTTTGTCAGAAATACCCAAATCTTTGCGCACCAGCTTACATGTATCAAATGCAGTTTCTTCTGTCTCCCTACTGATGAAATGTACTTCTTTGAGAGCCCTTCATGAGAGTGGCAGTGAGACAATAACAGATTTGCCATCTTCAATAGGGAATTTGAAGCATCTGAGGTATCTTAACTTGAGTGGTACTCAAATAAAAAAACTCCCCAAGTCAATTTGCAGTTTGTGGAATCTGCAGGTTTTGATTTTGAGTTATTGTTGGAATCTCAGGAAGTTGCCTAAACGCGTGAATCACCTTAAAGGTCTACAAGAATTAATGTTAGATGGCTGCAGTTCGTTAACTAGCATGCCCCCTGGTATTGGTCAATTAACTTCTCTGAGGATCTTGACTCGCTACATCGTTGGCAAAGACCCAGGCCTTCAAATCAGTGAACTAGGGCGCTTGAACCTGCAAAATAATCTAACTATAGAGCATTTGGAGAGAATCAGAGGAGTGATAGATGCCAAAGAAGCAAATTTGGTAAGCAAGGAGCTGAAAGAGTTATCTTTGTCATGGGATGCCAACATTGAATCAAGCACGAAAGAAAATGCTGAGCAGATGCTTGAAGCCCTTGAACCACATGCAAAACTCTCGAGTCTGCATGTAGAGGGATATAGAGGTGCCTATATGGCACAATGGATGAGTAACCCTAGTTTTGAACACTTGTTTTCAATGAACCTTGTAAGTTGCCATAACTGTTTAGAACTCCCACGACTGGGGAAACTCCCATCTCTGAAGCATCTAAGATTATCTGGTATGTATCGGATTCCATGCATCAACAATGAAACCAACAACAGAGTAAAGGCTTTCCCATCACTTGAAAGTCTTGAGCTCTGTGATCTAGCAAACTTGGAATATCTGTGCGAAGATAACATAGGAGGGAATTTTCCATGTCTTTCTAGGATGTTCATTTCTCGGTGCCCCAAGTTGGCCTTGCCTATTCTTCCATCTGTCAAAGATCTAGTTCTAATTGACTGCAAGGAAGTGTCTTTGAGCTCAATCTACAATCTCTACAATCTAAGATTCCTTCAAATTTCTGCTTCCCAAGAACTGACCACATTCCCACCGAGGATGTTGAGAGGCCTTAGAGATTTAGAGCAGTTAAACATCACTTACTGCTCTGAACTGGAATCATTTCCAGGGCAAATGTTAGAAGGTCAGCACTGTCTCCGAGCAATCAAGATTGATTCTTGCCAGAAGCTGAAGTCTTTGTGGGAAGGTTTCGAAGACCTTTCTTCGCTAGAAACTTTGGAAATCATAGAATGTAGGGAACTAGCAGCATTGCCAAATGGTATCATTCACCTTACATCTTTACAACGTTTAGTCATAACTTCCTATGTGGGTGGAGCCATGGGCACTATGATTCCTGTTAAGTTGGAAACATTACCAGAGTCATTAGGATACATTTCTTCACTGCAATATCTCAAGATAAGTGCACTTCAAAATTTGGCATCTTTACCTGAATTGGGAAACCTTGTATCCCTTCGAACCTTAGAGGTTAGTCACTGCCCAAAGTTGCTATCTCTTCCTGCAAGTATTCAACGACTCGCCAACTTGCTGGAGTTGAAGTTAAAGAGTTTGCGAAATCTTGCATCCCTGCCTAATGAGTTGGAGGGCCTTGCTTCTCTGGAAATGTTACTTGTTGAAGATTGTCCAAATTTGCCTTCCCTTCCCATGAGCATTCAAAGCCTCCCCAACTTGAAGAGCTTGGCTATAGCGGATTGCCCTGAACTACAGAGGAGATATAAGAAGGAAACAGGAGAATATTGGCACAAGATAGCACACATACCTTGTGTTAAGTTTTATCCCAAAGCTAGACCCCCCAAGACCAAGAGGCGCGAATAG 3492 0.4212 MAEAILEVVLENLSKFLENELGLFLGVNQEMRRLSGTLSTIRAVLEDAEEKQVTDMAIRNWLQKLKNAAHFLDDILDECATEGLRFQYERQSCRSTNRVRHSFLSSLHPVSILFRYKIARKMKNIRVLLDEIADEKRKFHFCETVIPRKNEVMEWRQTGPVISQPQLYGREGDKERVVDFLVSQASSSDGLSVYPIVGMGGLGKTTLAQLVFNDEKITKHFQLKIWVCVSQNFDVKKMLKAIMESATGHSCESLDLDPLQRKIQETLQRKRSLIVLDDVWNDDPEKWDRLKCVLSCGSRGSSIIVTTRLARVASIMETQTSHQLSGLSIGDCWELFKQRAFGPDKKEHAQLADIGKEIVKKCGGVPLAAKALGGLLRFTREEIVWLNVKESKLWNLPQDENSILSALRLSYWNLPFKVRPCFAYCAIFPKGKEINKHLLIQLWLANGFITPHGKLDVEDVGNEMWKELYWRSFFQDIQTDEFGIVASFKMHDLVHDLAQSVMREECHILDNTCSGDLSEKTRHLSAPIYRLRRSHFGLSEIPKSLRTSLHVSNAVSSVSLLMKCTSLRALHESGSETITDLPSSIGNLKHLRYLNLSGTQIKKLPKSICSLWNLQVLILSYCWNLRKLPKRVNHLKGLQELMLDGCSSLTSMPPGIGQLTSLRILTRYIVGKDPGLQISELGRLNLQNNLTIEHLERIRGVIDAKEANLVSKELKELSLSWDANIESSTKENAEQMLEALEPHAKLSSLHVEGYRGAYMAQWMSNPSFEHLFSMNLVSCHNCLELPRLGKLPSLKHLRLSGMYRIPCINNETNNRVKAFPSLESLELCDLANLEYLCEDNIGGNFPCLSRMFISRCPKLALPILPSVKDLVLIDCKEVSLSSIYNLYNLRFLQISASQELTTFPPRMLRGLRDLEQLNITYCSELESFPGQMLEGQHCLRAIKIDSCQKLKSLWEGFEDLSSLETLEIIECRELAALPNGIIHLTSLQRLVITSYVGGAMGTMIPVKLETLPESLGYISSLQYLKISALQNLASLPELGNLVSLRTLEVSHCPKLLSLPASIQRLANLLELKLKSLRNLASLPNELEGLASLEMLLVEDCPNLPSLPMSIQSLPNLKSLAIADCPELQRRYKKETGEYWHKIAHIPCVKFYPKARPPKTKRRE 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4548g00017 1163 Gene3D - 410 501 IPR036388 -
Pral4548g00017 1163 FunFam Probable disease resistance protein At1g63360 411 500 - -
Pral4548g00017 1163 FunFam Probable disease resistance protein At1g61300 149 321 - -
Pral4548g00017 1163 Pfam Rx N-terminal domain 6 92 IPR041118 -
Pral4548g00017 1163 PRINTS Disease resistance protein signature 362 376 - -
Pral4548g00017 1163 PRINTS Disease resistance protein signature 266 280 - -
Pral4548g00017 1163 PRINTS Disease resistance protein signature 193 208 - -
Pral4548g00017 1163 PRINTS Disease resistance protein signature 958 974 - -
Pral4548g00017 1163 CDD RX-CC_like 2 134 IPR038005 -
Pral4548g00017 1163 Gene3D - 327 409 IPR042197 -
Pral4548g00017 1163 Pfam NB-ARC domain 171 411 IPR002182 GO:0043531
Pral4548g00017 1163 SUPERFAMILY L domain-like 489 858 - -
Pral4548g00017 1163 Gene3D Ribonuclease Inhibitor 515 670 IPR032675 -
Pral4548g00017 1163 Gene3D Ribonuclease Inhibitor 863 996 IPR032675 -
Pral4548g00017 1163 Gene3D Ribonuclease Inhibitor 676 862 IPR032675 -
Pral4548g00017 1163 Coils Coil 31 51 - -
Pral4548g00017 1163 Gene3D - 149 323 IPR027417 -
Pral4548g00017 1163 ProSiteProfiles Leucine-rich repeat profile. 590 611 IPR001611 GO:0005515
Pral4548g00017 1163 Gene3D Ribonuclease Inhibitor 1005 1137 IPR032675 -
Pral4548g00017 1163 Gene3D - 6 136 - -
Pral4548g00017 1163 SMART LRR_typ_2 588 611 IPR003591 -
Pral4548g00017 1163 SMART LRR_typ_2 635 659 IPR003591 -
Pral4548g00017 1163 Coils Coil 118 138 - -
Pral4548g00017 1163 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 939 1068 IPR039203 GO:0050832
Pral4548g00017 1163 SUPERFAMILY L domain-like 850 1126 - -
Pral4548g00017 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 425 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4548g00017 Pral-Chr4548 62963 66454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4548g00017 196 666 WRKY Transcription Factor Family AT5G45050 24.376 1.00e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4548g00017 - - pvy:116139918 993.03