Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4548g00007 ATGAGCATTCCGCCGGCCATGTGGACGGGACTCCAGCCACCGCCGTTCACGGTGGCGCAGTGGCAGGAACTCGAACACCAAGCTCTTATCTTTAAGTATCTCAAAGCCGGATTATCCGTTCCGCCTGACCTTCTCGCTCCGATTCACAAGAGCCTCCAATTGATGCCGGTTCCTCATTCAGCTCTGGGTTATAGCTCCTATTTCGGGAAGAAGATAGACCCAGAGCCGGGAAGGTGCCGGAGAACCGACGGTAAGAAATGGAGGTGCTCGAGAGACGCACACCCAGATTCTAAGTACTGTGAGCGACATATGATTCGCCGTCGTCATCGTTCAAGAAAGCCTGTGGAAGCATCACAAGCTGCTCATCCTCCTGCTCAGTCTTCGGAGGTTAGTGGTGGGACCAGAAGTGGTTGTGGAAACTCATTTCCCAGCCTCCCTCTGCACACAAATGGCACTCGTGAGGGTTTAAGCCTTGGAAACAACGTATCACAGCTTCAGATTGAGTCTCTTCCCAGTGAGATGAACAAGAAAGAGTACAGGTTTGGGCTGCAATCTGAAGTAGATGAGCATGACTTCTTTCAGAAAGACCTAGGAAATGTGAGGTATCTTGGCTTTGACTCTTCCTCAGACAGCATGTGGTCTCAACTGTCTCACATTTCCTCGAACGCTGTCTCTGAATCAAGTGAAAGTTCTGTTATGGCTAACAACTGTTTTCAACTGCAAGCGATGCCGGATACTGAGCCTGCATCAAACATTGATGTCGTGTCATCCAAGCAACTCGTCTTCAATGGCCAGTTAGGTTCAACTGGTTGTTTGAAACAGGACTATCAGAACCCTCAGACTCTGATCAATGCTTGGCCATGGAAGAAGGAGTCTGGCTCACCTGTGATGGAGTACAGACCAAATAAGGATGCTAATGGCAACCCAGATGTCAATGTTGATTGCTGTGGATCCCTGTAA 960 0.4938 MSIPPAMWTGLQPPPFTVAQWQELEHQALIFKYLKAGLSVPPDLLAPIHKSLQLMPVPHSALGYSSYFGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRHRSRKPVEASQAAHPPAQSSEVSGGTRSGCGNSFPSLPLHTNGTREGLSLGNNVSQLQIESLPSEMNKKEYRFGLQSEVDEHDFFQKDLGNVRYLGFDSSSDSMWSQLSHISSNAVSESSESSVMANNCFQLQAMPDTEPASNIDVVSSKQLVFNGQLGSTGCLKQDYQNPQTLINAWPWKKESGSPVMEYRPNKDANGNPDVNVDCCGSL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4548g00007 319 SMART QLQ_2 14 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4548g00007 319 MobiDBLite consensus disorder prediction 100 158 - -
Pral4548g00007 319 Pfam QLQ 15 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4548g00007 319 Pfam WRC 74 116 IPR014977 -
Pral4548g00007 319 ProSiteProfiles WRC domain profile. 73 117 IPR014977 -
Pral4548g00007 319 MobiDBLite consensus disorder prediction 121 158 - -
Pral4548g00007 319 ProSiteProfiles QLQ domain profile. 15 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4548g00007 319 PANTHER GROWTH-REGULATING FACTOR 5 14 215 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4548g00007 Pral-Chr4548 7477 10072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4548g00007 1 119 GRF Transcription Factor Family AT3G13960 55.556 1.92e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral4548g00007 WRC 7.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4548g00007 - - pcin:129310568 357.451