Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4547g00006 ATGCGAATTCTGAAGAACACTTATCTATCGATATCAATGGCAGCTTCACGCTCTCTTCTAAAGTTGGACCAGATTGAAGGTAAAGGAAGAGGATTAGTTGCAACTCAGAATCTCAAAGCCGGCCAAATCATCCTCACTGAATCTCCCATCATTCTCTATTCCACTTTCCCTCTCTTCTCTGATTCATCTTCTTCTTACTGTGATCACTGCTTCAGGTCAATTTTACCAGTTTCAACCCCAACACAACACACTGTTTCATCATATTATTCATGCCCCTCTTGTTCGCGCCACCATTTCTGTAGCCAGAAATGCCTCTCTCTTGCTCTCAAATCCTCTCATTCTTCATGGGTATGTCAGGCCCTGTCTTGTCTTCGAGACTCTGGTTCAGAGCTTCTTCGTCAATCCCATGAACTTCAAGTCCAGGCTCGTTTCGTCGTTGCTGTCTATAACCTTTCCCTTCTTTCCCCTTCCAGTATTCAGATCTTGCTCTCTCTTCTGGGAACCCCAGATGACGCCATTGTTAAAGCTTCAAGCTTTCTCCACTCTCTGATTTCTTCTCTGTGCCCACCACCTCAGAATCAGCTCCCTGCAGAACTCACAGCTCAACTTATGGCTAAAGATAGGCTTAATTCTTTCTGCTTAATGGAGCCATATTCCCCAGATGGTCCTCAGAGATCCATCAAGGCCTATGCTATATACCCAAATGCCACTTTCTTTAACCATGATTGTCTTCCCAATGCATGCAGATTCGATTACGTCGATGATGGTGTTCCTGGAGATGAACACAACACGGACATTGTGATCAGGATGATTGAGGATGTTGCAGAGGGGAGAGAAGTGTGCATAAGCTATTTTAGAATCAATAGGGATTATTGGACGAGGAAGAGGATCTTGATGGAAGATTATGGGTTTGTTTGTGGGTGTGAGAGGTGCAAGATTGAAGCCAACTGGGGTGTTGATGATGATGATCAAAGTAGCGGATTGCCTCATGATTGGTTCCTACGGAAGTATGTATGTGATAAGAAGAACTGTTCTGGCACACTGGCTCCTCTGCCTCCAAAGGATGATGATGGGCAGTCTAATGTCTTGGAATGTAATTTCTGTGGCGATTTAAAACTTGAGGGTGCATGA 1131 0.4439 MRILKNTYLSISMAASRSLLKLDQIEGKGRGLVATQNLKAGQIILTESPIILYSTFPLFSDSSSSYCDHCFRSILPVSTPTQHTVSSYYSCPSCSRHHFCSQKCLSLALKSSHSSWVCQALSCLRDSGSELLRQSHELQVQARFVVAVYNLSLLSPSSIQILLSLLGTPDDAIVKASSFLHSLISSLCPPPQNQLPAELTAQLMAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPNATFFNHDCLPNACRFDYVDDGVPGDEHNTDIVIRMIEDVAEGREVCISYFRINRDYWTRKRILMEDYGFVCGCERCKIEANWGVDDDDQSSGLPHDWFLRKYVCDKKNCSGTLAPLPPKDDDGQSNVLECNFCGDLKLEGA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4547g00006 376 SUPERFAMILY SET domain 21 312 IPR046341 -
Pral4547g00006 376 Gene3D - 133 211 - -
Pral4547g00006 376 Gene3D - 66 127 - -
Pral4547g00006 376 Pfam SET domain 29 284 IPR001214 GO:0005515
Pral4547g00006 376 Gene3D SET domain 31 312 IPR046341 -
Pral4547g00006 376 ProSiteProfiles SET domain profile. 18 285 IPR001214 GO:0005515
Pral4547g00006 376 CDD SET_SMYD 209 311 - -
Pral4547g00006 376 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 322 373 IPR044238 -
Pral4547g00006 376 SMART set_7 18 291 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4547g00006 Pral-Chr4547 37965 39788 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4547g00006 SET 9.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4547g00006 - - gmx:100808530 462.225