Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4547g00005 ATGTTTACGTGCATAGCATGTACGAAAACGACGGATGACAGGGAAGAAGAAGAGGGTGGACGTGACAGTGGCACGCCCAGTACGAAAGAGGCCGTCAAAGGCCTGACGGCGCAGTTAAAAGATATTTTCATTAAGCAATGCAAACCCTGCACCGGGTCCCCTAGCTACAAGAAAGGGCAGAGGCCTTTTCCAGACTTCGATACTATATCTGAAGGGGTTCCATATCCTTACATTGGAGGAGGGGCTAGTTCAAGTTCAACCCCTGCGTGGGACTTTACAAGCTCCCGTTATCCAGGTGGTAGACCTGACCCAAGATTTGGTGGGGCTGCACGCGACTCAACAGTATCAGTTCAATCATGTGATGTAGTTTTAGAGGAGGAGGACGAACCCAAGGAGTGGATGGCTCAGGTGGAACCTGGTGTTCACATCACATTTGTGTCTCTTCCTAATGGAGGGAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCAATAAATGGCAAGCTCAGAGATGGTGGGGTGAGAATTACGACCGGATCATGGAACTCTATAACGTCCAAAGATTCAATCGACAAGCTTTTCAAACTCCCTCGAGGGCTGATGATGAGGCAAGAGATTCTTCTTATACAAGACTCGGATCTGCACGAGAGAGCAAGGAGTGGACACCACGGCATCACTATAGGCCCTCGGGATTTAGAGGACACTACCCTTCTGACCATTTTGATCAGGGTGTAGGCCACCAGTTCCAAGCAGGGTCATCCATGGAACCACCCCGCCCAACTACTGATTCTGTAAATGAACCTTCTGTCAGTAATGCCGGTGACATGGAGGCAGAATGGATTGAGGAAGATGAGCCTGGGGTCTACATCACAATCCGACAATTAGCTGATGGTACCAGGGAGCTCCGACGTGTCAGATTCAGTCGGGAAAGATTTGGAGAAGTAAATGCAAAGACATGGTGGGAGGAGAACAGGGAGAGAATACAAGAACAGTACCTTTGA 1005 0.4896 MFTCIACTKTTDDREEEEGGRDSGTPSTKEAVKGLTAQLKDIFIKQCKPCTGSPSYKKGQRPFPDFDTISEGVPYPYIGGGASSSSTPAWDFTSSRYPGGRPDPRFGGAARDSTVSVQSCDVVLEEEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQAFQTPSRADDEARDSSYTRLGSARESKEWTPRHHYRPSGFRGHYPSDHFDQGVGHQFQAGSSMEPPRPTTDSVNEPSVSNAGDMEAEWIEEDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQEQYL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4547g00005 334 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
Pral4547g00005 334 Pfam Transcription factor regulating root and shoot growth via Pin3 278 333 IPR013591 -
Pral4547g00005 334 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Pral4547g00005 334 MobiDBLite consensus disorder prediction 9 24 - -
Pral4547g00005 334 MobiDBLite consensus disorder prediction 196 272 - -
Pral4547g00005 334 MobiDBLite consensus disorder prediction 248 272 - -
Pral4547g00005 334 Pfam Transcription factor BRX N-terminal domain 25 50 IPR027988 -
Pral4547g00005 334 ProSiteProfiles BRX domain profile. 279 334 IPR013591 -
Pral4547g00005 334 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 334 IPR044532 -
Pral4547g00005 334 MobiDBLite consensus disorder prediction 199 236 - -
Pral4547g00005 334 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4547g00005 Pral-Chr4547 24336 30883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4547g00005 1 334 Major Intrinsic Protein MIP AT1G31880 65.625 1.03e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4547g00005 - - ccaj:109789470 523.857