Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4547g00003 ATGAAGAAGAAATATTACTCTTGGGAGGAGTGTATAAATCTGAGAGAGGTCAAGTCGTTGAGGAAAATGAACCACCCTAATATTGTGAAACTGAAGGAAGTTATTCGAGAATGTGACATTCTATACTTTGTTTTCGAGTACATGGAATACAACCTGTACCAGCTCATGAAAGACAGGTCAAAGCTGTTTTCTGAAGGCCAAGTTAGAAATTGGTGTTTTCAAATTTTTCAAAGTCTTGCTTACATGCACCAGCATGGATATTTTCACCGCGACCTGAAGCCAGAAAACTTGCTGGTTACCAAGGATGCTATTAAAGTTGCTGATTTTGGTCTAGCACGAGAGATCAGTTCACAACCACCCTATACTGAATATGTCTCCACACGGTGGTATCGAGCTCCTGAAGTGCTGCTTCAGTCTTATCTCTATGGTCCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAACTCTTCACTCTCCGCCCGCTTTTTCCTGGTGCCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTGATTGGCAGTCCCACCGTGGAGTCATGGGCTGGTGGTCTTAAACTTGCAAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGTGTTCATCTTTCTGTTCTAATCCCCTCTGCAAGTGCTGATGCTATCGACCTTATGACAGCACTTTGCTCATGGGATCCCAGCAAGAGGCCGACAGCTGCTGAGGCCCTTCAGCACCCATTCTTCCAGAGTTGCTTTTATATTCCTCCTTCCCTCCGCACCAAAGCAATAGCCAGAACTCCTCCATCCGCTGGGGTGCGGGCATCGGGGGATCGCCATGGGGCTAAGAGATATTCAGGTGCTTTGTCTAATTCGAAGCTAACCAATAATTATCCTCCCACTAAATTGCAACCTCCTTTTGCTCCAGGTGTACAACGCAAACTGGATTTGACAAATGAGGATGGAAATAAAACTGATAAAGCCTTGAAGACTGTCAAACAACCAAAGTATAGGCCTCCCGGAAAGAACAGCCCAACATCGATGAACAAGGGAAGAACAGTACGTGGGGTTGCAGAGACAGCTGAGAAGTTGGCTAATATGAGTGTTGGAATCCGAAAACAATCTATGGGAGAAGCTCGACCTCCTCCTCCAATGAAAGCTGGAGTCCAGTGGGGTTCTGAATCTAAGAACTTGCTGCCGAGGCCTGCTCAAGTGGTTTCTACTGGAAGAACTTTTCCTAGGAAAGTTGCCGGATGA 1257 0.4574 MKKKYYSWEECINLREVKSLRKMNHPNIVKLKEVIRECDILYFVFEYMEYNLYQLMKDRSKLFSEGQVRNWCFQIFQSLAYMHQHGYFHRDLKPENLLVTKDAIKVADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYGPEVDMWAMGAIMAELFTLRPLFPGASEADEIYKICSVIGSPTVESWAGGLKLARDINYQFPQLAGVHLSVLIPSASADAIDLMTALCSWDPSKRPTAAEALQHPFFQSCFYIPPSLRTKAIARTPPSAGVRASGDRHGAKRYSGALSNSKLTNNYPPTKLQPPFAPGVQRKLDLTNEDGNKTDKALKTVKQPKYRPPGKNSPTSMNKGRTVRGVAETAEKLANMSVGIRKQSMGEARPPPPMKAGVQWGSESKNLLPRPAQVVSTGRTFPRKVAG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4547g00003 418 CDD STKc_MAK_like 1 249 - -
Pral4547g00003 418 MobiDBLite consensus disorder prediction 289 354 - -
Pral4547g00003 418 Pfam Protein kinase domain 12 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4547g00003 418 Gene3D Phosphorylase Kinase; domain 1 7 49 - -
Pral4547g00003 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 308 - -
Pral4547g00003 418 MobiDBLite consensus disorder prediction 374 418 - -
Pral4547g00003 418 Gene3D Transferase(Phosphotransferase) domain 1 50 255 - -
Pral4547g00003 418 MobiDBLite consensus disorder prediction 317 333 - -
Pral4547g00003 418 SUPERFAMILY Protein kinase-like (PK-like) 7 253 IPR011009 -
Pral4547g00003 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Pral4547g00003 418 SMART serkin_6 8 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4547g00003 418 FunFam serine/threonine-protein kinase MAK isoform X1 50 259 - -
Pral4547g00003 418 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4547g00003 Pral-Chr4547 19324 23643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4547g00003 14 256 Core Cell Cycle Gene Families AT3G48750 39.516 2.00e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pral4547g00003 Pkinase 3.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4547g00003 K08829 - gmx:100810150 694.501