Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4543g00026 ATGGCGAAATTCTCGGTTGGTGGGGACGACGATGGGGAGGGACCCAGCAACCCGACCCAAAAGCGACGCCGGATTGTTGTTAGATGCGGCACCGTCGGAGAAGACGAACGGCAAGACATCGGAAACCCAAGCGGAACAGAAGACGAAAGAGAAGATATTGTGCAGGAGCTCGAGGTGCTACAAAGTGAAGAAGATCCATGTAACGATGATTCTGGCAATTGCTTTGGAGCTAGATCAAGCGATAGCGGTGAAGACAACAGTGTTTCAGCGCCTGAAAATAGGGATAGGTCCATTTCTGTCACCCTTAGCGATCCTGATGTGTTTGATTGCTGCATTTGCTATGAACCCTTGAGTATCCCTATTTTCCAGTGTGAGAATGGGCATATTGCTTGCTCTTCCTGTTGTGTTAAACTTGGGAACAAGTGTCCCATGTGCTCTATGCCCATTGGCTATAACCGTTGCCGAGCCATTGAGAAGGTGCTGGAATCTGTTAAGATATCCTGCCTAAATGCACAATATGGTTGTAAAGAAACAATAACTTACAGCAAGAAAAATGACCATGAAAAGCAATGCATTTATGCACCATGTACATGCCCGCAATCAGGTTGCAATTTTGTTGCCCCCACTAAGGAGCTGTCACTCCACTTTCTCCTTAAACATGGGGGTTCTGCGAGGAATTTTACCTATAATAGCTTCTTCTCTATCTTCCTGAGGGTAAATGATGAAGTTATTATTCTTCAAGAACAGAATAGTGCCGATCTATTCATGCTCAAGAATAAAGCGGGGGATCTGGGGAATATGGTTAATGTTAGCTGCATTTGTCCCAATTTATTCCGAAAGGCATGCTACTATGATATTCTGGCCAGATCCCAGGGATGCTGTCTGAAAATACATTGTTTAGCGGAGAACGAACATGGTCGCAAAGCCAATAATACTACCCCGACAGGGTTTCTTTTGATCCCATCTTGTTTTTTTGGCTCTGGACAGATCAAACTGGACATTCGCATTGTTATAACACCCATCTTGCAGATGTGCAGAGATCATAGTGTTGTGTATTTGTAA 1062 0.4454 MAKFSVGGDDDGEGPSNPTQKRRRIVVRCGTVGEDERQDIGNPSGTEDEREDIVQELEVLQSEEDPCNDDSGNCFGARSSDSGEDNSVSAPENRDRSISVTLSDPDVFDCCICYEPLSIPIFQCENGHIACSSCCVKLGNKCPMCSMPIGYNRCRAIEKVLESVKISCLNAQYGCKETITYSKKNDHEKQCIYAPCTCPQSGCNFVAPTKELSLHFLLKHGGSARNFTYNSFFSIFLRVNDEVIILQEQNSADLFMLKNKAGDLGNMVNVSCICPNLFRKACYYDILARSQGCCLKIHCLAENEHGRKANNTTPTGFLLIPSCFFGSGQIKLDIRIVITPILQMCRDHSVVYL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4543g00026 353 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 70 337 IPR044286 -
Pral4543g00026 353 ProSiteProfiles Zinc finger RING-type profile. 110 146 IPR001841 -
Pral4543g00026 353 MobiDBLite consensus disorder prediction 1 52 - -
Pral4543g00026 353 SUPERFAMILY TRAF domain-like 163 336 - -
Pral4543g00026 353 MobiDBLite consensus disorder prediction 77 97 - -
Pral4543g00026 353 ProSiteProfiles Zinc finger SIAH-type profile. 163 221 IPR013010 GO:0008270
Pral4543g00026 353 MobiDBLite consensus disorder prediction 27 50 - -
Pral4543g00026 353 CDD RING-HC_SIAHs 108 146 - -
Pral4543g00026 353 Pfam Seven in absentia protein family 153 220 IPR018121 GO:0005737|GO:0006511|GO:0007275
Pral4543g00026 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 216 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4543g00026 106 202 C3H Transcription Factor Family AT2G41980 38.144 1.36e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4543g00026 K04506 - qsa:O6P43_009323 373.244