Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4543g00021 ATGGCTCTGCATCTGCTCTTCATCTCTCTACTTCCACTGGCGGCATTGGCATCTCCTAATTGTAACTCCACTTGTGGAAACATCACAATCTCTCCTCCCTTCGGAATGAATGAACCCCGCTGCTACCACAACGAGTGGTTTGAGATCAATTGCTCCCAAGACTCTGCTGGAATTCCCAAGCCATATCTCAAGAAGATTCGACTGGAGGTCACCAAATTCGATTACAGCTCCTGCAAGGTCTGGGTCAACAACCCTATATACTCATGGCACTGCAAAATCCCCGCCACACATGGCGGCGCAAATGTAAGTCTTCCCCTAGATATGTCTGCCAGTCCTTTTGCTTACTCTCGGGAGGACAACGTTTTTCTGGGTGCGGGCTGCGACACACAAGCTCTTCTTCTGCAAGGCTCCCACGACGGCGTTTTCGGCGGCTGCGTCTCCATTTGCAGCAGCGTCAACCATAATCATTCCGCAATTGGAGGTTGCCTGGGCCAGTATTGCTGCACCGCTTCTCTGCCTAGGGGTCTGTCGGAATATAACCCCAGAATTGAGCACGTGGCAGGAAATCATGGCGATTGCAGTTATGCTCTTATTGTTGAAGACAAGGGCCAAAACGATTGGGGCAGCAGGATTCTCAGTTCGTTAAGTCATTCGAGTAGCGTTCCTGCAGTGCTCGAATATTATAGCGCCTGCAATGTCTCTGATATTTTGTCTTCCGAGGCGCTAAACTCGCCTCTCGCACCTCAGTGCGCTAGTCCTCTGTTCCCCGGCGCCAATCCTTGTGGTTCTACAGGTGGGCGAGGCAACTCGGGATCCAAATCTCAAAGCTTGTCGGTGATAGGGGTGGTTTTCTCGAGCCTAGTATCCGTTGTTTTCCTGGTGGGCGTGTGGATCCAATACAAAATCTTCAGGAAAAGCAGAATAAACAAACGAAAGGAGAAGTACTTCAAACAAAACGGCGGCTTGCTGTTGCAACGGAGCTCGTTAAATGGCGACGTCAGCTTCGACAAAACCAAACTGTTCGGCTCCAAGGACCTCGAAAAAGCCACCGACCGCTTCAACGTTAATAGAGTGCTGGGAAAGGGAGGCCAGGGCACTGTTTACAAGGGCATGCTCGCCGACGGTCAAATTGTTGCCGTCAAGAAACTCAGACTCCAAGGAAATGTTGAAGAATTCATCAACGAAGTGGTTATTCTTTCTCAGATTAACCACAGAAACGTGGTGAGGTTGTTAGGGTTTTGCCTGGAGACACAAGTTCCTCTGCTGGTTTATGAATTCATTCCAAACGGTAACCTCTACGAGCACCTGCACGAACAAAATGAGGAGATCTCAATGACGTGGGACGCTCGTTTAAGAATTGCCGGCGAAGTTGCGGGAGCTCTGTTCTACTTGCACTCGGCTGCTTCGCGGCCCATTTACCATAGAGACATCAAATCAACTAACATACTGTTGGATGACAAGTTGAGAGCAAAGGTTGCTGATTTTGGAACCTCAAGAATGGTGTCTATGGAAAAGACTCACATCACGACTCAAGTTCAGGGAACTTTTGGGTATTTGGATCCTGAGTATTTCCACACGAGTCAATTCACCGACAAGAGTGATGTGTACAGCTTTGGGGTTGTTCTGGTTGAACTGCTGACAGGTCAAGTTCCAATATCATGTGGAAGGCCACAGGAAGCTCAGAGTCTGGCTTCATATTTCATAATGTGCATGGATGAAGGGCGTTTATATGATATTGTGGACCCCAGAATCACGGAGGAGGCGAAAGAAGATATCACGGCGGTGGCACACCTGGCAAGAAGATGCTTGAGCTTGAATGGGAGGACGAGGCCGAGCATGAGAGAAGTGACTGCGGAATTAGAAGGGATTCAGAGACTGAGAAGCAGGTCGTGTAATATGGACCCACAAATTTACGAGGAAATTGAGTTGGGGGCAGCATTGGAAGGCTGCCAGATTTGGGGTGCAGATTACGCGTCATCCGCATCCACTCTAAACACCGCAGCTTCCCACTCATCGTCCCAGGGCTTCCTTGTTTCGGAAGACAGATAA 2049 0.4929 MALHLLFISLLPLAALASPNCNSTCGNITISPPFGMNEPRCYHNEWFEINCSQDSAGIPKPYLKKIRLEVTKFDYSSCKVWVNNPIYSWHCKIPATHGGANVSLPLDMSASPFAYSREDNVFLGAGCDTQALLLQGSHDGVFGGCVSICSSVNHNHSAIGGCLGQYCCTASLPRGLSEYNPRIEHVAGNHGDCSYALIVEDKGQNDWGSRILSSLSHSSSVPAVLEYYSACNVSDILSSEALNSPLAPQCASPLFPGANPCGSTGGRGNSGSKSQSLSVIGVVFSSLVSVVFLVGVWIQYKIFRKSRINKRKEKYFKQNGGLLLQRSSLNGDVSFDKTKLFGSKDLEKATDRFNVNRVLGKGGQGTVYKGMLADGQIVAVKKLRLQGNVEEFINEVVILSQINHRNVVRLLGFCLETQVPLLVYEFIPNGNLYEHLHEQNEEISMTWDARLRIAGEVAGALFYLHSAASRPIYHRDIKSTNILLDDKLRAKVADFGTSRMVSMEKTHITTQVQGTFGYLDPEYFHTSQFTDKSDVYSFGVVLVELLTGQVPISCGRPQEAQSLASYFIMCMDEGRLYDIVDPRITEEAKEDITAVAHLARRCLSLNGRTRPSMREVTAELEGIQRLRSRSCNMDPQIYEEIELGAALEGCQIWGADYASSASTLNTAASHSSSQGFLVSEDR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4543g00021 682 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 328 426 - -
Pral4543g00021 682 ProSiteProfiles Protein kinase domain profile. 353 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4543g00021 682 Gene3D Phosphorylase Kinase; domain 1 325 426 - -
Pral4543g00021 682 FunFam Wall-associated receptor kinase 2 427 642 - -
Pral4543g00021 682 CDD STKc_IRAK 359 623 - -
Pral4543g00021 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Pral4543g00021 682 Gene3D Transferase(Phosphotransferase) domain 1 427 641 - -
Pral4543g00021 682 Pfam Protein kinase domain 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4543g00021 682 Pfam Wall-associated receptor kinase galacturonan-binding 21 83 IPR025287 GO:0030247
Pral4543g00021 682 SUPERFAMILY Protein kinase-like (PK-like) 336 621 IPR011009 -
Pral4543g00021 682 SMART serkin_6 353 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4543g00021 682 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 626 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4543g00021 Pral-Chr4543 145826 150710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4543g00021 16 627 Receptor kinase-like Gene Family AT1G16260 43.338 4.85e-159 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4543g00021 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4543g00021 - - pcin:129287161 938.332