Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4543g00004 ATGAAGCAGCCAGAAGACTACCTTACTGGAGATGAAAAATATGATGAGGATGGGGATAACAAGGAAAATGAGCATGGTGGCGATGAAGGAGAAGGCGATGAAGATGCTGAGGTTGGCAATGATCTTCAAGATGATGCAGAGTACTTGATAGGAGACGAAGGTCCAACTACGGCCGAGGGGGAACTTGAAAAAGGTCTTCCAGCAGAAGATTCGGATACGGGTAATGAGTCTTGTAGACATTACAGCCATGGATCTTATCTGGTCCAAGGAAAGATGGACCATGGAATGGAGGATTATATTTTTGCTGAACATAGGAACATCAATGGCTGCGACTTAGGACTATATGCAATTTTTGATGGCCACGCTGGTCAAGCTGTTGCAAAATACTTGCAAGGCCATCTATTTGAAAGAATATTGAGTGAGCCTGACTTCTGGAAGAATCCAGTACGTGTCCTTAAGAGATCATGCGAGGCCATGGATGAAGAGATCCTAGCAAAGATAGCAGATTCACGAGGGGGATCAACAGCTGTTGTAGGAATACTTGTTAATGGAGTGAAGTTGCTGGTAGCCAACGTCGGCGATTCTCGAGCAATATTATGCAGAAACGGTGTGGCAAAACAAATTACAGCGGATCATGAGCCAGTGAGGGAGAAAGATCTCGTTGAGAGCAAAGGAGGTTTTGTGTCCAAGGCACCCGGATGTGTTCCAAGAGTGGATGGTGTATTAGCAATGAGCAGGGCATTTGGGGATGGAAGGTTGAAGGAACACATTACTGCAGAACCAGACGTGATGGTTCAAAACATCACTGAGGACACTGAGTTCGTCATTTTGGCTAGTGACGGCCTCTGGAAGGTGATGACGAACGAAGAAGCTTGTGAGTGCGTGAAGGATATGGATGATGCAAAAAAAGCAGCTAAGAAGCTGGTTAAAGAAGCATTAGCTCAAGGAAGCTATGATGATATTTCATGCATTGTTGTAATGTTCCAGGCTAATTGA 996 0.4488 MKQPEDYLTGDEKYDEDGDNKENEHGGDEGEGDEDAEVGNDLQDDAEYLIGDEGPTTAEGELEKGLPAEDSDTGNESCRHYSHGSYLVQGKMDHGMEDYIFAEHRNINGCDLGLYAIFDGHAGQAVAKYLQGHLFERILSEPDFWKNPVRVLKRSCEAMDEEILAKIADSRGGSTAVVGILVNGVKLLVANVGDSRAILCRNGVAKQITADHEPVREKDLVESKGGFVSKAPGCVPRVDGVLAMSRAFGDGRLKEHITAEPDVMVQNITEDTEFVILASDGLWKVMTNEEACECVKDMDDAKKAAKKLVKEALAQGSYDDISCIVVMFQAN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4543g00004 331 Gene3D - 63 331 IPR036457 -
Pral4543g00004 331 MobiDBLite consensus disorder prediction 1 27 - -
Pral4543g00004 331 Coils Coil 295 315 - -
Pral4543g00004 331 MobiDBLite consensus disorder prediction 1 78 - -
Pral4543g00004 331 SUPERFAMILY PP2C-like 77 329 IPR036457 -
Pral4543g00004 331 MobiDBLite consensus disorder prediction 28 48 - -
Pral4543g00004 331 FunFam Probable protein phosphatase 2C 39 74 329 - -
Pral4543g00004 331 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Pral4543g00004 331 PANTHER PROTEIN PHOSPHATASE 59 327 IPR015655 GO:0004722|GO:0006470
Pral4543g00004 331 MobiDBLite consensus disorder prediction 57 77 - -
Pral4543g00004 331 Pfam Protein phosphatase 2C 94 321 IPR001932 -
Pral4543g00004 331 SMART PP2C_4 78 326 IPR001932 -
Pral4543g00004 331 ProSiteProfiles PPM-type phosphatase domain profile. 82 328 IPR001932 -
Pral4543g00004 331 SMART PP2C_SIG_2 87 328 IPR001932 -
Pral4543g00004 331 CDD PP2Cc 81 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4543g00004 Pral-Chr4543 25921 27943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4543g00004 65 329 PP2C-type Phosphatase Gene Family AT3G15260 53.160 3.94e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4543g00004 - - gmx:100814772 417.927