Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4542g00033 ATGGCCATGACGGGGAGGGTTTTAGTTGAGGGACTTTCCCTTGTGCTGAATCTAGCGATAATCTCAGTGATCCTTCCCACTGGAGAAGCTCAACCAAAGTCAATTTTTATTAATTGCGGTTCAAATTCTTCCGTGAATGCTGACGATAGAAGATGGATTGGGGATTTGGCCCCTAATAATAATATTACCCTTAGTTCTCCTGGTATTGCTGCTTCCGCCTCTGCATTAAATGGGAATTCATCCTTTGACCCTCTCTACAAAACCGCCAGGTTTTTCACTGGTGCCTACAATTACACAATTAAAGGCGTTCAGGGAAACCATGTTGTTAGACTCCATTTCTGCCCGTTTTTGTTTGAAGACTACAATGTAAATGAGTCCTCATTCAATGTTGCGGCCAATGGTCTGAAACTACTGGCGGAGTTCAATGTTCCTGGAGAGATATCACACAAGAATATGTACTTGCAGAATTCTGGAAGCAATTCAACTTCATTTTTCTTGATTAAAGAATATATTCTTGCTGTCAATTCAGATGTGCTTGTGATTGAACTCGTCCCAACAAAAAGCTCATTTGGCTTTATCAATGCCATTGAGATTGTCCCAGTTCCAGATGAGCTTTTTGTTGGCTCTGTCAATAAAGTTGGTGGAGGTGATGCAAGTTTGAATTTGATTGGACGGGGGATGGAGACCATGTACAGGTTGAATGTTGGTGGTCCCAAAATCACATCCAATGAGGATAAAGATATATGGAGGACTTGGGAAATGGATTCTGGCTACATGATCATAGAAAGTGCCGGGTCAGGAATAAAGAACCATTCTAATATAACATATGCTTCAATGAATGATTCTTCAGTGGCTCCTCTCGTTGTGTATGAGACTGCAAGTACAATGTCCAACACTCAAGTCTTGGAGAAAAGGTTTAACATGTCATGGAAGTTCGAAGTGGACCCTGATTTTGAGTATATGATCCGACTACATTTCTGTGAGCTGGAATTTGACAAGGCAAATGAGAGAATTTTTAGGATCTATATAAACAACAAGACAGCGGCAGATAATGTTGATATTTTTGTACAAGCAGGAGGGATGAATAAAGCATATCACCAGGATTATGTAGATGGTGTGTCCTCAAGAATCAACACACTATGGGTTCAGTTAGGTCCTGATTCAGCTGCTGGTGCTGCCGGAACTGATGCTCTTTTAAATGGGCTAGAAATTTTCAAGATTAGTCGAAATGGGAATCTGGCCTATGTAGAGAGATATGGTTCAGCTAGCAATTCATCTAGTAAATCAAAAACGCGGATTCTTTGGTTGGGAATTGGAGCAGGTCTAGCTTCTATTGCCATAGTTACATTAATAGTTGCTCTGTTTTTCTGGTTTTGCAAAAGAAGCAGGAAAACAACCAGTGATACCAAAAGCAATGCTCCAGGTTGGCGGCCATTGTTTCTTTATGGTGCCACTGTGAACAGCACTGTTAGTGCCAAGGGTTCAGCAGGATTTCAGAATCCATATGGATCAGTGGCAACAACACGACTTGGTAAGCGGTTTACACTAGCAGAAATTCGTGCTGCAGCAAAGAATTTTGATGAGAGTTTGATAATTGGGTTAGGAGGCTTTGGTAAGGTGTACAAGGGAGAGATTGATGATGGGGTCCCTGCTGCAATTAAGCGAGCCAACCCACAGTCTGAGCAAGGTCTGGCTGAATTTGAGACGGAGATTGAGATGCTCTCCAAACTCAGGCACAGGCATCTGGTGTCCCTGATTGGATTCTGTGAAGAGCAAAATGAAATGATTTTGGTTTATGAGTATATGGCAAATGGTACTCTCAGAAGTCATCTATTTGGGAGCAATCTTCCACCATTAACTTGGAAGCAGCGCCTAGAAGTGTGCATAGGTGCTGCAAGAGGACTCCATTATCTGCATACAGGTGCAGAGCGTGGAATAATCCACAGGGATGTCAAGACAACCAATATACTGTTAGATGAGAACTTTGTAGCTAAGATGTCTGATTTTGGGTTGTCAAAAGATGGTCCTGCTTTGGACCATACTCATGTCAGTACAGCTGTGAAAGGAAGTTTTGGTTACCTAGACCCTGAGTACTTCAGACGACAACAGCTGACTGAGAAATCAGATGTGTACTCTTTTGGTGTGGTGTTGTTTGAAGTTGTTTGTGCCCGAGCTGTGATAAATCCTACATTGCCTAAAGATCAAATCAATCTTGCAGAATGGGCAATGAGGTGGCAGAGGCAGAGATCGCTTGAAACTATCATCGATCCACGTCTTGCCGGAGGCTATCATCCTGAGTCCTTGTCTAAGTATGGAGAGATAGCAGAAAAATGTCTTGCTGATGAGGGGAAGAACAGGCCCACAATGGGGGAGGTGTTGTGGCACTTGGAGTATGTTCTTCAACTCCATGAAGCTTGGTTGAACACTAGCACCAGAGAAGCTTCATTCTCAAGCAGCCAAGCCTTAGGAGGAGTGAAAGAGGGAGAACCAGAAGAGATACAGGAGCCATTGGCTAGTGCAGTTGAAGAGAATGGCTTGGCCACTAGAGGAGTCAGAGAAACGGATGCTGCTACTTGA 2577 0.4307 MAMTGRVLVEGLSLVLNLAIISVILPTGEAQPKSIFINCGSNSSVNADDRRWIGDLAPNNNITLSSPGIAASASALNGNSSFDPLYKTARFFTGAYNYTIKGVQGNHVVRLHFCPFLFEDYNVNESSFNVAANGLKLLAEFNVPGEISHKNMYLQNSGSNSTSFFLIKEYILAVNSDVLVIELVPTKSSFGFINAIEIVPVPDELFVGSVNKVGGGDASLNLIGRGMETMYRLNVGGPKITSNEDKDIWRTWEMDSGYMIIESAGSGIKNHSNITYASMNDSSVAPLVVYETASTMSNTQVLEKRFNMSWKFEVDPDFEYMIRLHFCELEFDKANERIFRIYINNKTAADNVDIFVQAGGMNKAYHQDYVDGVSSRINTLWVQLGPDSAAGAAGTDALLNGLEIFKISRNGNLAYVERYGSASNSSSKSKTRILWLGIGAGLASIAIVTLIVALFFWFCKRSRKTTSDTKSNAPGWRPLFLYGATVNSTVSAKGSAGFQNPYGSVATTRLGKRFTLAEIRAAAKNFDESLIIGLGGFGKVYKGEIDDGVPAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGSNLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSLETIIDPRLAGGYHPESLSKYGEIAEKCLADEGKNRPTMGEVLWHLEYVLQLHEAWLNTSTREASFSSSQALGGVKEGEPEEIQEPLASAVEENGLATRGVRETDAAT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4542g00033 858 Gene3D Phosphorylase Kinase; domain 1 494 601 - -
Pral4542g00033 858 FunFam Receptor-like protein kinase FERONIA 226 409 - -
Pral4542g00033 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Pral4542g00033 858 FunFam receptor-like protein kinase FERONIA 491 601 - -
Pral4542g00033 858 PANTHER OS07G0166700 PROTEIN 512 803 IPR045272 GO:0004714|GO:0006468
Pral4542g00033 858 SUPERFAMILY Protein kinase-like (PK-like) 502 798 IPR011009 -
Pral4542g00033 858 Pfam Protein tyrosine and serine/threonine kinase 532 793 IPR001245 GO:0004672|GO:0006468
Pral4542g00033 858 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524
Pral4542g00033 858 FunFam Receptor-like protein kinase FERONIA 602 815 - -
Pral4542g00033 858 Pfam Malectin-like domain 37 407 IPR024788 -
Pral4542g00033 858 Gene3D - 33 201 - -
Pral4542g00033 858 Gene3D - 226 409 - -
Pral4542g00033 858 MobiDBLite consensus disorder prediction 818 858 - -
Pral4542g00033 858 SMART serkin_6 526 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4542g00033 858 ProSiteProfiles Protein kinase domain profile. 526 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4542g00033 858 Gene3D Transferase(Phosphotransferase) domain 1 602 820 - -
Pral4542g00033 858 CDD STKc_IRAK 532 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4542g00033 Pral-Chr4542 161375 164839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4542g00033 14 839 Receptor kinase-like Gene Family AT1G30570 64.813 0.0 1115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4542g00033 Malectin_like 1.3e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4542g00033 - - pcin:129287274 1560.04