Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4542g00019 ATGGCTCTTTCTATGCACAAAGATTCACCCAGCAAGCAGATGGACTCGAGCAAGTACGTGAGGTATACACCTGAGCAGGTCGAGGCTTTGGAGAGGGTATATGCAGAATGCCCAAAACCTAGTTCTTTGAGGAGACAACAGCTCATTAGGGAGTGTCCTATACTTGCTAACATTGAGCCGAAACAGATCAAAGTTTGGTTTCAGAACCGCAGATGTCGTGAAAAGCAGAGGAAGGAATCTTCACGGCTGCAGACAGTAAACAGGAAGCTCACTGCAATGAACAAGTTGCTAATGGAAGAGAATGATCGACTGCAGAAGCAGGTGTCACAGTTGGTGTACGAAAATGGATATATGAAACAACAGATACATACTGCATCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAACAACAACAGCAAAACCCAACACCTCAGCATCCCCAGAGGGATGCCAATAACCCAGCTGGTCTTCTGGCGATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCCGCAATTGTAGTGGAGTAGCAGCACGAGCTTGTGGCCTCGTGAGTCTAGAGCCCACGAAGGTTGCTGAGATTCTTAAAGATCGTCCATCTTGGTATCATGATTGCCGCTGCCTGGATGTGTTGAGCATAGTCCCCACTGGGAGTGGAGGGACAATTGAACTCTTGTACATGCAGACTTATGCACCGACGACATTGGCAGCAGCACGTGACTTTTGGACTCTTAGATATACTACAAATATGGAAGATGGTAGTCTTGTGATATGCGAGAGGTCATTGACTTCTTCAACTGGTGGCCCCACAGGTCCTCCTGCTTCAAACTTTGTTAGGGCTGAAATGCTTCCTAGTGGTTACCTAGTTAGACCCTGTGAGGGTGGTGGATCCATTATTCACATTGTTGATCACGTGGATTTAGATGCTTGGAGTGTTCCTGAAGTTCTCAGGCCCCTTTATGAATCATCAAAAATCCTGGCTCAGAAAATGACTATTGCTGCCTTGCGACACATAAGGCAAATTGCTCAAGAAACAAGTGGAGAAATTCAATATGGTGGGGGCCGCCAGCCTGCTGTTTTAAGAACATTTAGTCAGAGACTTAGCAGGGGATTCAATGATGCTGTGAATGGATTTGTGGATGATGGTTGGTCACTACTGGGTAGTGATGGTGCTGAGGACGTGACCATAGCCATTAACTCATCTCCGAATAAATTTTTTGGGTCTCACTATGGTACCTCGATGTTTCCTGCATTTGGAGGCGGGGTGTTATGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGCTTTCTGAGGGAACATCGCTCAGAGTGGGCTGATTATGGGGTTGATGCATACTCTGCTGCGTGTCTTAAGGCTAGTCCCTACGCAGTTCCTTGTGCAAGGCCTGGTGGCTTTCCCAGCAGTCAGGTCATTTTACCACTTGCTCATACTATTGAACATGAGGAGTTCTTGGAGGTTGTTCGTATAGAGGGTCATGCATTTTCCCCTGAAGATGTGGCTCTTGCCCGGGATATGTATCTTCTGCAGCTATGCAATGGAACTGATGAGAATGCAATTGGATCATGTGCTCAACTTGTTTTTGCTCCTATTGATGAATCATTTGCTGATGATGCTGTCTTGCTTCCTTCTGGCTTCCGTGTCATACCATTGGATCCTAAAACAAATGGTTCAGCAGCAAGTAGAACTCTGGATCTGGCATCTACGCTTGAAGCTGGATCTGGCAATGCCCGAGCACCTGGTGACACTGATCCAAACAGCTATAATCTTAGGTCGGTCCTTACCATTGCATTTCAATTTATGTTTGAGAACCATATGCGGGACAATGTGGCTGCCATGGCTCGCCAGTATGTGCGAAGTGTTGTGGGGTCTGTTCAGAGAGTTGCCATGGCTATTGCTCCCTCTCGGCTAAGTACCCAGCTTGGGCCAAAGTCTCTTCCTGGTTCTCCAGAGGCTCTTACTTTGGCACGATGGATCTGCAGAAGCTACAGGATTCACACGGGGGGTGAGATTTTTCATGTTGAGTCCACGGCAACTGATGCAATCTTGAAGCAACTCTGGCACCATTCAGACGCAATCATGTGCTGCTCTGTAAAAGCAAATGCATCCCCAGTTTTCACCTTTGCAAACCAGGCTGGACTTGACATGCTTGAAACCACTCTTGTGGCCCTTCAAGATATAATGCTTGACAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTCTGCTCTGAGTTCGCCAAGATAATGCAGCAGGGGTTTGCTTATCTGCCGGCAGGAATATGTGTATCGAGCATGAACAGGCCAGTGTCATATGAACAGGCCGTTGCCTGGAAAGTTCTGAATGATGATGATTCCAATCACTGCCTTGCCTTCATGTTCATGAACTGGTCTTTTGTCTGA 2538 0.4728 MALSMHKDSPSKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMKQQIHTASATTTDNSCESVVMSGQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYHDCRCLDVLSIVPTGSGGTIELLYMQTYAPTTLAAARDFWTLRYTTNMEDGSLVICERSLTSSTGGPTGPPASNFVRAEMLPSGYLVRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLLGSDGAEDVTIAINSSPNKFFGSHYGTSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCNGTDENAIGSCAQLVFAPIDESFADDAVLLPSGFRVIPLDPKTNGSAASRTLDLASTLEAGSGNARAPGDTDPNSYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWICRSYRIHTGGEIFHVESTATDAILKQLWHHSDAIMCCSVKANASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFAKIMQQGFAYLPAGICVSSMNRPVSYEQAVAWKVLNDDDSNHCLAFMFMNWSFV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4542g00019 845 MobiDBLite consensus disorder prediction 133 156 - -
Pral4542g00019 845 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 845 IPR044830 GO:0003700
Pral4542g00019 845 FunFam homeobox-leucine zipper protein ATHB-15 201 382 - -
Pral4542g00019 845 Pfam START domain 166 373 IPR002913 GO:0008289
Pral4542g00019 845 CDD homeodomain 18 78 IPR001356 GO:0003677
Pral4542g00019 845 SMART START_1 165 375 IPR002913 GO:0008289
Pral4542g00019 845 Coils Coil 87 114 - -
Pral4542g00019 845 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Pral4542g00019 845 CDD bZIP 70 109 - -
Pral4542g00019 845 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Pral4542g00019 845 Pfam MEKHLA domain 700 844 IPR013978 -
Pral4542g00019 845 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Pral4542g00019 845 Gene3D - 10 84 - -
Pral4542g00019 845 CDD START_ArGLABRA2_like 160 376 - -
Pral4542g00019 845 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
Pral4542g00019 845 MobiDBLite consensus disorder prediction 133 158 - -
Pral4542g00019 845 SUPERFAMILY Bet v1-like 166 377 - -
Pral4542g00019 845 SUPERFAMILY Bet v1-like 413 600 - -
Pral4542g00019 845 Gene3D - 184 379 IPR023393 -
Pral4542g00019 845 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Pral4542g00019 845 SMART HOX_1 15 81 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4542g00019 Pral-Chr4542 88564 95484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4542g00019 5 845 Homeobox Transcription Factor Family AT2G34710 79.882 0.0 1411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pral4542g00019 START 8.3e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4542g00019 K09338 - cave:132170336 1564.28