Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4540g00034 ATGGAAGGCAATGATGGAAATAAAGAGCAGATTGTTGATGTTCGGTCGGTGGTTGAAGCTGTTTCTGTAGAAGATGGAGACGTCCCTGTGTACCAGGTTGAAAGCCTGTGCATGCGCTGCGGTGAAAATGGGACGACAAGATTTTTACTGACTTTAATTCCGCACTTCAGAAAGATTTTGCTGTCAGCTTTTGAATGTCCTCATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCAGGAGAAATCCAACCACGTGGTTGCTGCTACAGTTTGGAGATCCCACCAGGCAATCCGAAGATGCTAGATCGACAAGTGGTAAAATCAGAATCTGCTACTATTAAGATACCAGAGTTGGATTTTGAGATACCTCCTGAGGCTCAACGTGGAACTCTTTCAACGGTGGAAGGTATACTAGTACGAGCTGCTGATGAACTTCAGGCCCTTCAAGATGAGCGCAAAAAAGTTGACCCACAGACGGCTGAAGCAATTGACCAGTTCTTGATGAAATTGAGAGCTTGCACGGCTGGAGAGCTTTCATTCACATTTATTCTTGATGACCCTGCTGGAAACAGCTTCATTGAAAATCCGTGTGCTCCATCATCTGATCCATCATTGAGTATCAAATTCTATGAGCGTACTCCTGAGCAGCAAGCATCATTAGGATATCTTGTTGACTCATCACAAATTGGAGCGGGTCATGCAGCAGTGGAAGAAGCTGGGGTTGCTGATCAAGGGAGGAGAGAACCACATGGGTCAATAGGGGCAGCTGCTGGTCATCGAGCCATTGCACAGAGTAATAGTGCTGAAATTGCAGAAGCCTTATTTAGATATACTGCCCCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGCTTGTGCTACTAGGTGCGAGACTCGAATGTTCGTCACTAAAATTCCATATTTCCAGGAAGTTATTGTTATGGCATCCACCTGTGATGCTTGTGGTTACCGCAACTCCGAGTTGAAACCTGGTGGACGGATTCCTGAAAAAGGAAAGAAGATTACTCTTACCGTGAAAAATGTTAAAGATTTAAGCCGTGATGTGATAAAGTCTGATACTGCTAGTGTAAAAGTTCCTGAACTCGACTTGGAGCTAGCAAGTGGCACTCTAGGAGGAATTGTTACGACTGTTGAAGGTCTAATCACAAAAATTAGTGAAAGCCTTGAGAGGGTGCATGGATTTACTTTTGGAGACAGTCTTGACGAAAATAGAAGGAGCAAATGGCTAGACTTCAGAGCAAGGCTAAAAAAGCTTCTTAGCTTGGAAGAACCGTGGACCTTAATTCTTGATGATGCATTATCCAATTCGTTCATAGCGCCAGCCACTGATGATCTAAAAGACGACAACCAATTGACATTTGAGGAATACGAGAGGTCGTGGGAGCAAAATGAAGCATTGGGTCTGAATGATATTGACACCTCTTCTGCTGATGGAGCTTATGAAGCAGGAAATGATGCCAAAACTGAGTGA 1494 0.4411 MEGNDGNKEQIVDVRSVVEAVSVEDGDVPVYQVESLCMRCGENGTTRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLEIPPGNPKMLDRQVVKSESATIKIPELDFEIPPEAQRGTLSTVEGILVRAADELQALQDERKKVDPQTAEAIDQFLMKLRACTAGELSFTFILDDPAGNSFIENPCAPSSDPSLSIKFYERTPEQQASLGYLVDSSQIGAGHAAVEEAGVADQGRREPHGSIGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACATRCETRMFVTKIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKKITLTVKNVKDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDENRRSKWLDFRARLKKLLSLEEPWTLILDDALSNSFIAPATDDLKDDNQLTFEEYERSWEQNEALGLNDIDTSSADGAYEAGNDAKTE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4540g00034 497 Coils Coil 131 151 - -
Pral4540g00034 497 Gene3D ZPR1, A/B domain 81 222 IPR042451 -
Pral4540g00034 497 Gene3D ZPR1, A/B domain 334 476 IPR042451 -
Pral4540g00034 497 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Pral4540g00034 497 Pfam ZPR1 zinc-finger domain 288 446 IPR004457 GO:0008270
Pral4540g00034 497 FunFam Zinc finger protein ZPR1 279 333 - -
Pral4540g00034 497 FunFam Zinc finger protein ZPR1 334 476 - -
Pral4540g00034 497 NCBIfam ZPR1 zinc finger domain 37 219 IPR004457 GO:0008270
Pral4540g00034 497 NCBIfam ZPR1 zinc finger domain 289 480 IPR004457 GO:0008270
Pral4540g00034 497 PANTHER ZINC FINGER PROTEIN ZPR1 10 489 IPR040141 -
Pral4540g00034 497 FunFam Zinc finger protein ZPR1 25 80 - -
Pral4540g00034 497 SMART zpr1 35 195 IPR004457 GO:0008270
Pral4540g00034 497 SMART zpr1 288 448 IPR004457 GO:0008270
Pral4540g00034 497 Gene3D ZPR1, zinc finger domain 278 333 IPR042452 -
Pral4540g00034 497 Gene3D ZPR1, zinc finger domain 27 80 IPR042452 -
Pral4540g00034 497 MobiDBLite consensus disorder prediction 475 497 - -
Pral4540g00034 497 FunFam zinc finger protein ZPR1 81 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4540g00034 Pral-Chr4540 214932 224752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4540g00034 5 495 C2H2 Transcription Factor Family AT5G22480 76.423 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4540g00034 K06874 - gmx:100814878 842.417