Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4533g00014 ATGAGACTCTCTTCAGCTGGTTTTACTCCTTCACCCCAGGAAGGAGAAAAGCGAGTTCTAGATTCTGAGCTTTGGCATGCTTGTGCTGGCCCTCTTGTTTCCTTGCCGGCTGTTGGAAGCCGCGTCGTGTACTTTCCCCAGGGTCACAGTGAACAGGTTGCTGCATCGACTAACAAGGAGGTGGACGTCCATTTTCCCAACTACCCAAGCTTACCTCCCCAACTTATTTGTCAACTTCATAATGTGACTATGCATGCTGACGTAGAGACGGATGAAGTATACGCCCAGATGACCTTGCAACCTCTGAATCCTCAAGAACAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTTCCAGTAAACAGCCAACGAACTACTTCTGCAAAACTTTGACTGCTAGTGACACGAGCACTCATGGGGGATTCTCTGTTCCTCGTAGGGCTGCTGAGAAAGTGTTTCCTCCATTGGATTTCTCTCAGCAGCCTCCTGCTCAAGAATTAATTGCACGGGACTTGCATGGTAATGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCTAAACGACATCTACTTACAACAGGATGGAGTGTCTTTGTAAGTGCTAAGAGGCTTATTGCTGGTGATTCTGTGCTGTTTATTTGGAATGATAAGAATCAATTGCTTCTTGGTATTCGACGTGCCAATCGACCACAAACAGTGATGCCATCATCAGTGCTCTCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCACACGCAGCTGCAACCAACAGTCGTTTCACCATATTCTACAACCCCCGTGCTAGCCCATCAGAATTTGTCATACCCCTAGCAAAGTATGTTAAAGCTGTGTATCATACCCGAGTTTCAGTTGGCATGCGCTTCCGGATGTTGTTTGAAACGGAGGAATCAAGTGTCCGGCGATACATGGGCACAATCACTGGTATTAGCGACCTGGATCCTGTGAGGTGGCCGAATTCACATTGGCGATCAGTTAAGGTTGGCTGGGATGAGTCCACAGCAGGAGATAGGCAACCTAGAGTCTCCTTGTGGGAAATCGAGCCATTAACAACATTTCCAATGTATCCTTCCCCATTCCCTCTTAGGCTTAAACGACCATGGCCTACTGGACTGCCTTCTTTCCATGGTATGAAGGATGATGATTTGGGTATGAATACTCCACTGTTTTTGGATAGAGGGCTTCAGTCTCTTAATTTTCCTGGAATTGGGGTTACTCCTTGGATGCAACCAAGGTTTGATCCCTCCTTTCTGAATTTGCAATCTGACATGTACCAAGCCATGACTGCTGCTGCACTTCAAGATATAAGGACTGTAGATCCTTCCAAACAGCATGCAACATCCCTGTTTCAATTTCAGCAACCACAGAACTTCCCCAACAGGACTGCTGCTTTAGTGCAGGCTCAGATGATGCAGCAGTCTCAACCTCAGCAAGCTCTTCAAAACAATCAAGAGAATATGCAACCATCTGAATCTCAGGCTCTAAGTCAGACTCATCTTCAGCATCAAAACTCTTTCATTAATCATCATCATCAGCAGCAGCAGCAGCACCACCACCACCAGCAGCCACAACAGCAACATCAACAGCAAAGTTTTTCTGATCACTCCAATACTGTCTCTACAATGTCTCAATTTGTTTCAGCACCTCAACCTCAGTCGCCACCGGCTCAAGCTATTCCTTCATTGTGCCATCAGCAAAGTTTTTCTGATTCAAATGGGAACAATGTAACTGCTGCTATGGTTTCTCCCCTCCATAGTATTTTGAGTTCTTTTCCCCAGGAAGAAACTTCCCACCTTCTCAATATTCCTAGGACTAGTTCTTGGATTCCTGTTCAACCTTCTACTGCTACTGCTACTTGGCCTTCCAAGCGTGTTGCTGTGGACCCTCTTCTTTCTTCCGGAGCTTCTCAATGTGATCTGCCTCACATGGATCAGATAGGGCAGCGCCAGAATACACTGTCTCAAAGTGTGGTTACCTTGCCACCCTTTCCTGGAAGGGATTGCTCGATTGACCAAGAAGGGAGTACTGATCCACAAAACCATCTTTTATTTGGTGTTAATATAGAGCCCTCATCTCTTTTAGTGCACAATGGGATGTCAAGCCTTAAGGGGGCTCGCAGCAACATTGATTCCACAACCATACCATTTCAGTCTTCTAATTATCTGAATACTGCAAACCCTGAATCTGCGTTGAATCCTGCAATGTCACAAACCATTTGTGAATCAGGATTCTTGCAGGCCTCAGAAAATATGGGCCAAGGAAATTCTCCAAAAACCTTTGTAAAGGTTTACAAGGCAGGGTCCTTTGGAAGGTCGCTGGATATCACTAAATTCAGCGGCTACCATGAGCTGCGTCGCGAGCTTGCTCGCATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGACAGAGAGAATGATGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAGTTTGTCAACAGTGTATGGTGTATCAAGATACTTTCCCCACAAGAAGTGCAACAAACGGACAATAATCGTCTTGAGCTTTTGAATTCAGTTCCGATTCAAAGACTTTCCAATGGAACATGTGAAGACTTTGTGAGCCGACAGGACCCAAGAAGTTTAAGCTCTGGGATCACAACCGTGGGGTCTCTAGACTACTAA 2703 0.4636 MRLSSAGFTPSPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDVHFPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKEAYLPAELGTSSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSFHGMKDDDLGMNTPLFLDRGLQSLNFPGIGVTPWMQPRFDPSFLNLQSDMYQAMTAAALQDIRTVDPSKQHATSLFQFQQPQNFPNRTAALVQAQMMQQSQPQQALQNNQENMQPSESQALSQTHLQHQNSFINHHHQQQQQHHHHQQPQQQHQQQSFSDHSNTVSTMSQFVSAPQPQSPPAQAIPSLCHQQSFSDSNGNNVTAAMVSPLHSILSSFPQEETSHLLNIPRTSSWIPVQPSTATATWPSKRVAVDPLLSSGASQCDLPHMDQIGQRQNTLSQSVVTLPPFPGRDCSIDQEGSTDPQNHLLFGVNIEPSSLLVHNGMSSLKGARSNIDSTTIPFQSSNYLNTANPESALNPAMSQTICESGFLQASENMGQGNSPKTFVKVYKAGSFGRSLDITKFSGYHELRRELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQTDNNRLELLNSVPIQRLSNGTCEDFVSRQDPRSLSSGITTVGSLDY 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4533g00014 900 Gene3D - 291 363 - -
Pral4533g00014 900 MobiDBLite consensus disorder prediction 476 520 - -
Pral4533g00014 900 FunFam Auxin response factor 291 363 - -
Pral4533g00014 900 SUPERFAMILY CAD & PB1 domains 763 842 - -
Pral4533g00014 900 MobiDBLite consensus disorder prediction 527 568 - -
Pral4533g00014 900 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Pral4533g00014 900 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pral4533g00014 900 SMART B3_2 127 229 IPR003340 GO:0003677
Pral4533g00014 900 FunFam Auxin response factor 762 856 - -
Pral4533g00014 900 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Pral4533g00014 900 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Pral4533g00014 900 MobiDBLite consensus disorder prediction 476 568 - -
Pral4533g00014 900 Pfam AUX/IAA family 758 851 IPR033389 -
Pral4533g00014 900 Gene3D - 125 228 IPR015300 -
Pral4533g00014 900 ProSiteProfiles PB1 domain profile. 767 851 IPR000270 GO:0005515
Pral4533g00014 900 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 856 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pral4533g00014 900 Gene3D - 763 856 - -
Pral4533g00014 900 CDD B3_DNA 126 227 IPR003340 GO:0003677
Pral4533g00014 900 FunFam Auxin response factor 125 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4533g00014 Pral-Chr4533 67456 73886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4533g00014 1 479 B3 DNA Binding Superfamily AT1G30330 86.570 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pral4533g00014 AUX_IAA 7.3e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4533g00014 - - gmx:100798719 1433.31