Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4533g00007 ATGGCTCCCGCCGGAGCCACCGCTCTTCACTCTTCCCTCTGCAGCTTCTCTTCTCACAAACCGTTGTCTCCAAATTCCCTGCAACCAAACACCCAGTTGGGTCCCAAACCCAAAAGCCTCCTCCAAAAGCACCCACTCTATACTCCAACACACACCAGACTCTCCCTTGAATTCAAAGAAAAAATTCTCTGCCTTGAAATAATGGGTGTTGATTCCGGCAAGGCACTTTCAGTAAACCCTGATCTCAGAACTGCAACCATGGAATCCATCCATTCCATCATCTCCTTCCTTCATTCCAAAGGCATCCAACAGAATGACTTACCCAAGATTCTGGGTATGTGCCCTAAGATTCTCACCTCCAGCATCAAATCTGAGCTTAGCCCAGTTTTTGATTTCCTCTCTCTGGACCTTAAAGTCCCAGATCATAGCTTTAGGAAGGTCATTAACAAATGCCCAAGGTTGCTCACTTCAAGTGTCAAAGACCAGCTCAAGCCAGCTTTGTTCTACCTTCAGAGGCTAGGGTTCAAGAATATGTCAGCCCTGGCTTATCAAGATTCTGTCTTGTTGGTTTCTAATGTAGAAAGGACTCTCATTCCTAAACTGAAGTTTCTGGAGAATCTGGGGTTTTCAAAGGAAGAAACAAAAGATATGGTGTTGAGATGCCCAGCATTGTTGACCTTTAGTATTGACAATAATTTCCAGCCCAAATTTGAGTATTTTGCTGAGGTAATGGGCAGAAAGTTGGAGGAGCTGAAGGAATTTCCTCAGTATTTTGCTTTTAGCTTGGAAAACAGGATAAAGCCTAGGCATATGGAAGTTGTGCAAAGTGGCATCAATATGCCTTTGTCTTTGATGCTTAAGAGTACTGATGATGAATTTAGGGAGCTCATAAAGCAGAAAACTGGATGA 909 0.4367 MAPAGATALHSSLCSFSSHKPLSPNSLQPNTQLGPKPKSLLQKHPLYTPTHTRLSLEFKEKILCLEIMGVDSGKALSVNPDLRTATMESIHSIISFLHSKGIQQNDLPKILGMCPKILTSSIKSELSPVFDFLSLDLKVPDHSFRKVINKCPRLLTSSVKDQLKPALFYLQRLGFKNMSALAYQDSVLLVSNVERTLIPKLKFLENLGFSKEETKDMVLRCPALLTFSIDNNFQPKFEYFAEVMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGINMPLSLMLKSTDDEFRELIKQKTG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4533g00007 302 MobiDBLite consensus disorder prediction 20 37 - -
Pral4533g00007 302 MobiDBLite consensus disorder prediction 20 42 - -
Pral4533g00007 302 FunFam Transcription termination factor MTEF1, chloroplastic 133 301 - -
Pral4533g00007 302 Gene3D Transcription termination factor 3, mitochondrial 124 301 IPR038538 -
Pral4533g00007 302 PANTHER CGI-12 PROTEIN-RELATED 208 298 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 Pfam mTERF 188 293 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 Pfam mTERF 74 177 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Pral4533g00007 302 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4533g00007 Pral-Chr4533 26346 27574 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4533g00007 mTERF 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4533g00007 K15031 - gmx:100788221 470.314