Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral452g00003 ATGACGAGAAGCCCTTACTATGACAAAAACGGAATAAAGAGAGGTGCGTGGAGTAAGGAAGAGGATGAAAGGTTAAGAGCATATGTTGAGATATATGGTCATAGAAATTGGCGCCAACTCCCCAAACACGCGGGGACATGGTCTTTGATTGCCGAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCGTTGGCATAGCCACCTAAAGAAGCAACTGGAGTGCAATCAAGCGGACAAATTTGAGCTCAGAATGAATTCTAGTTGTACTTGTGAAAGAGAAACAACAAAGCATTTCGAACCTGAAAACCCTCTGCTTGGTTTCGTTGCTGCTTCCTCCGCTAATGTCTTGGAAAGCTCACCGATTGAAGAATCAAGCGATGCTAATAATGCCGCATGGGAAATAGTTGAAGAATTCGGGGATTTTGGGACCCAACCAATAACCATTGAAGCACGGATATCTGGAATCTCAAAGGAATCAGAAGAAGAGTTAGGAGAATGTAAGAGTGCATTGGAGAAGTTCTTGAGTGATATAGCTCAAATTGAATCTGAGAATGGGAAGGATGAGCCAAAGTGCCCAGATTTACTCATACAAGAAGCTGAAATGAAGCATGAGCATCTACAAACTCATAAGGACTTGTGTCCTATATCAGGTAATATTGATCCTCTTCTTGAGGAGATTGACCCTTGTGCTATAACTACTATTCTTGTTGAAGCTTTTGATAATATGAGTGATATTGAGGTGGATGAAGAAATTGTCTGTGAATCCCCTCATGTTTTTGTACATGCTAATACTCATTTTGTTGCTCTTAGTGGTAGTGATTTGGATGAAGATGCTGTTTTGTGTGATGATTTACATGCCAATCATGTTCCTCTTCATAGTGTTGGAAGCGTTGTTATTGATAAGTATGAGAACATTGAGATTGCTAAATCTTGTTTGAGTGCAATTATTGATGACAAATGCACATATTTGGAAGGGATCTCCTCAACACCAAACTCCACCATATCCTCTTGGACCTCTTTCAATTGA 1032 0.4031 MTRSPYYDKNGIKRGAWSKEEDERLRAYVEIYGHRNWRQLPKHAGTWSLIAERLPGRSDNEIKNRWHSHLKKQLECNQADKFELRMNSSCTCERETTKHFEPENPLLGFVAASSANVLESSPIEESSDANNAAWEIVEEFGDFGTQPITIEARISGISKESEEELGECKSALEKFLSDIAQIESENGKDEPKCPDLLIQEAEMKHEHLQTHKDLCPISGNIDPLLEEIDPCAITTILVEAFDNMSDIEVDEEIVCESPHVFVHANTHFVALSGSDLDEDAVLCDDLHANHVPLHSVGSVVIDKYENIEIAKSCLSAIIDDKCTYLEGISSTPNSTISSWTSFN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral452g00003 343 ProSiteProfiles Myb-like domain profile. 9 70 IPR001005 -
Pral452g00003 343 SUPERFAMILY Homeodomain-like 3 76 IPR009057 -
Pral452g00003 343 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 45 - -
Pral452g00003 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 74 IPR017930 -
Pral452g00003 343 Pfam Myb-like DNA-binding domain 14 70 IPR001005 -
Pral452g00003 343 Gene3D - 12 75 - -
Pral452g00003 343 CDD SANT 16 70 IPR001005 -
Pral452g00003 343 SMART sant 13 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral452g00003 Pral-Chr452 16580 22634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral452g00003 1 77 MYB Transcription Factor Family AT2G31180 40.336 2.87e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral452g00003 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral452g00003 K09422 - gmx:100781032 123.25