Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4521g00020 ATGGTGGAGCAACGTGGAGAAGTTGATGACAACAATTCCACAGAAGACTGGTTCTTGCGAGCACAAGAACTAGTACCCTTTGCTGTTAACAAGGCCAAAGAGGTCAAAGGCTTTTCTGGTAGGTGGAAAGTGATTGTTTCAAAGATAGAACAGATCCCATCGTGCTTATCAGACTTGTCTAGCCATCCGTGTTTCTCCAAGAATTCTCTCTGTAAGGAGCAATTGCAGGCTGTGTCGAAGACCCTCGAGGAAGCCATCAATTTAGCCGCGTTATGCGTGAAGGAGAGGTACGAAGGTAAGCTTCGAATGCAGAGTGATCTCGATGCTTTATCTGGGAAATTGGATTTGAATTTACGAGATTGTAGGCTATTGATCAAGTCTGGTGTCCTTGGTGAGTCTGCTTTTCCACTGGGTATGTCTGATGATGTGAAACAAGAGAATGATGTAAGAGAATTGTTTGCACGCCTTCAGATTGGTGACTTGGAGGCAAAGAACAGAGCTATAGACAATCTTGTTGAAGCAATGAAGGAAGAAGAAAAGAGTGTTATGGCTGTTCTAGGAAGAATCCAAATGGCTTCTTTAGTTCAATTGTTAACGGCTACTTGTACTAGGATAAGGGAAAAGGCTGTTACTGTCATATGTTGTCTCGCAGAATCTGGGAACTGTGAGAATTGGCTTGTCTCTGAAGGTGTCTTGCCGCTTCTTATTCGGCTTATTGAATCTGGTGGGGCTATTGGAAAAGAGAAGGCTGCAATATGTCTCCAAAGGCTGTCCATGTCTGAGGAATCGGCCCGGGAAATTGTCAGAAATGGCGGCGTTGGACCACTAATGGAGCTATCTCATAATGGGGATTCCGTGTCCCAATCTGCTTCTGCTTGTTCTTTGAAGAACATATCGGTTCTTCCTGAATTGAGACAAGCTTTGGCTCAAGAAGGAATTGTGAAAACCATGATCAATCTCCTTGATCATGGAATTCTAGTGGGGAGCAAGGAATATGCTTCAGAATGCTTAAAGAATCTCACATCAAGCAATGAGAACCTGAGAAGGTCTGTTGTATCAGAAGGGGGAGCTAGGAGCCTTCTTGCTTATCTTGATGCTCCAATCCCTCAAGAATCAGCTGTCACTGCATTGAGGAATCTAGTCGGATCAATTGGCGAGCGAGATTTGATCTCATTAGGCCTCCTTCCTCGTTTGATCCATGTGCTAAACACAGGATCTTCTGGAGCTCAGCAGGCTGCTGTGTCAGCAATATGTAGAGTTTTGATCTCTGCAGAAATGAAGAAACTGGTGGCTGATGCTGGATTCATCCCACTGCTCATCAACATGCTGGAAGCTAAATCGACCAGCGCGAGAGAATTCGCGGCGCAAGCCATCGCGAGCTTGATGACAGTAACACAAAACCGCAGGGAAGTGAGAAGGAATGATAAGAGTGTGCCAAATTTGGTTCAGTTGCTTGATCCAAGCCCACAAAATAGTGCAAAGAAATATGCAATTTCTTGTTTATGTTCACTTTCTTCAAGCAGGAAATGTAAGAGGCTGATGATTGCTTATGGGGCAATTGGATACCTGAAGAAGCTTAAAGAGATGGATATTCCAGGGGCTAAAATGCTACTTGACAGATTGGAAAGAGGGAAATTGAGAAGCTTATTTAGCAGAAAATGA 1662 0.4404 MVEQRGEVDDNNSTEDWFLRAQELVPFAVNKAKEVKGFSGRWKVIVSKIEQIPSCLSDLSSHPCFSKNSLCKEQLQAVSKTLEEAINLAALCVKERYEGKLRMQSDLDALSGKLDLNLRDCRLLIKSGVLGESAFPLGMSDDVKQENDVRELFARLQIGDLEAKNRAIDNLVEAMKEEEKSVMAVLGRIQMASLVQLLTATCTRIREKAVTVICCLAESGNCENWLVSEGVLPLLIRLIESGGAIGKEKAAICLQRLSMSEESAREIVRNGGVGPLMELSHNGDSVSQSASACSLKNISVLPELRQALAQEGIVKTMINLLDHGILVGSKEYASECLKNLTSSNENLRRSVVSEGGARSLLAYLDAPIPQESAVTALRNLVGSIGERDLISLGLLPRLIHVLNTGSSGAQQAAVSAICRVLISAEMKKLVADAGFIPLLINMLEAKSTSAREFAAQAIASLMTVTQNRREVRRNDKSVPNLVQLLDPSPQNSAKKYAISCLCSLSSSRKCKRLMIAYGAIGYLKKLKEMDIPGAKMLLDRLERGKLRSLFSRK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4521g00020 553 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 230 272 IPR000225 GO:0005515
Pral4521g00020 553 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 551 - -
Pral4521g00020 553 Gene3D - 146 537 IPR011989 -
Pral4521g00020 553 SMART arm_5 260 300 IPR000225 GO:0005515
Pral4521g00020 553 SMART arm_5 423 463 IPR000225 GO:0005515
Pral4521g00020 553 SMART arm_5 383 422 IPR000225 GO:0005515
Pral4521g00020 553 SMART arm_5 343 382 IPR000225 GO:0005515
Pral4521g00020 553 SMART arm_5 465 506 IPR000225 GO:0005515
Pral4521g00020 553 SMART arm_5 301 342 IPR000225 GO:0005515
Pral4521g00020 553 Coils Coil 158 181 - -
Pral4521g00020 553 SUPERFAMILY ARM repeat 190 527 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4521g00020 Pral-Chr4521 328777 330564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4521g00020 398 537 U-box Gene Family AT2G23140 34.752 1.74e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4521g00020 - - gmx:100789140 778.089