Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4521g00016 ATGGAGAAAGAATTGATTCGATTGTTTGGAGCAGTGAAGAAGGCGGCAGACGCAGCGGCGACTTCAACCGCCGGCGAGCTCGAAGAATGTCAATGCCTTGATGCGTTCAAGCTGCTCAAGAAATTTCCTGTCAACTATGAAATTCTGGTAGCAACCCAATTGGGTAAACATCTGAGAGTTCTAACAAAGCATCCCAGAAGGAAGATCCAGGCTTTTGCTATGGGCATAGTAGAGATATGGAAAGCCATAGTCATCAAGGGAATAAGACAGAAGAAGAAAGAAAAAGTTGAGAAAACTCATAGGACTGAGACATCAAACTCCGAAAAAGGAAATATTAAGAATGAGATGTGA 351 0.4274 MEKELIRLFGAVKKAADAAATSTAGELEECQCLDAFKLLKKFPVNYEILVATQLGKHLRVLTKHPRRKIQAFAMGIVEIWKAIVIKGIRQKKKEKVEKTHRTETSNSEKGNIKNEM 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4521g00016 116 SMART TFS2_5 8 86 IPR003617 GO:0005634
Pral4521g00016 116 Pfam TFIIS helical bundle-like domain 37 84 IPR017923 -
Pral4521g00016 116 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 4 93 IPR035441 -
Pral4521g00016 116 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1 101 IPR035441 -
Pral4521g00016 116 ProSiteProfiles TFIIS N-terminal domain profile. 10 87 IPR017923 -
Pral4521g00016 116 MobiDBLite consensus disorder prediction 93 116 - -
Pral4521g00016 116 PANTHER TRANSCRIPTION FACTOR IIS FAMILY PROTEIN-RELATED 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4521g00016 Pral-Chr4521 290396 291598 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pral4521g00016 Med26 3.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4521g00016 K03145 - atri:130811538 110.923