Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4517g00017 ATGAAACTACAGGCGCCAATTCCCGGGCAGATGTCAGGTCAGGTACCTAATCAGTCAGGATCCCAGTTGCCTGGACTGACCCAGCCAAATCGAAATGCCCTCCCTCAGACACCAAATTTAGCTGGTGTTCCGCGCTCCACCATTAATATGGACCCTGAATTTCTTAGAGCGCGCACGATTATGCAAGAGAAGATCTATGAGATCTTACTGCAGCGGCAACAACATCCTGTAACAGAATTACAGAAAAGAAGGTACAAGGATTTTGCTAAACGCTTGGAGGAAGCCATGTTAAAAACTGCCACATCCAAGGAGGAGTACTTGAACTTGGATACCCTAGAGAGCCGTCTTCTTAATTGCATCAGACGGCCATCTATGAATAATCATAGCCAGCAATATCCCCAGCATGTTGGCTCTTCTCCAGTAGGTACAATGATACCAACACCTGGTATGCCACATGTTGTGAATTCAAACATGACAGCTACATCTTCTGTAGATGCCTCAATGATTGTTACCCCTGGATGTAATAGCATGGCATCTCCATCTGTCAATAGTGGAAGCATGTTTCCCACAGGTGGTTTGCATGGGAATTCTTTAAGTAGATCTGATGCTTTGTCTAATGGCTATCAGCCATCATCAACCAGCTATTCAATTGGTTCTGGGGGAACCATGTCATCAATGGGTGCGCAGAGAGCTGGAAGCCAGATGATTCCCACTCCTGGATTTACTAGCAGCAATAACCCATACATGAATGTAGAATCTTCTGATAATAGTGGTGTCTTTTCCAGTGTTGAATCCTCAATGGTCTCACAGCCTCAGCAGCAGAAACAGCATGTTGGGGGCCAAAACAATAATGTGATGCAGAACCTTGGCAGCCAAATGGGTAGTGGAATGAGATCTGGGTTACAGCAAAAATCTTTTGCATACTCAAATGGAGCTATAAGTAGTGGGTTAGGATTGATTGGAAACAATAGGCAACAGACAAGTGAATCTGGCTTTGTTGATGCCTATGCCACAACTTATACGAATTCGCCTAAACACCCACAGCAGCACTTTGATCAAAATCAGCAACTGCCAGGGCACGGTGATGGATATGGATTGAATAATGTTGACTCATTTGCTTCTGGAAACTTCTATGCATCTGCAACATCCTCTGGATCTATGATGAACAGTCAGAACTTGAATTCAGTAAAATTGCCTGCAGTATCTCAAACCAACACTCTTATAAGTAGTCATTCCAATTCCAATTTACATGGTATGCAGCAGGCTGCTCATCTTAAGTCTCAAGCTATGAATCAGTTAGAGAAGTTGAATTTTCAGTCTTCTTTTACTTCAAGAGAGGGCCTTCTGGATCCTCAACGGCAATATCTGCAGCATTCCCAACAATTTCAACAGCCAGAGCAGTATGCTCAACAGCAATTTGAACAGTCTGAGCAGTATGCTCAGAAGCAATATCAACTTAAGCTGCGAAGTCAGCAACCTCAGCATTTGGTCAACAGCGGTGCTTTTGGCCAGTCTCATATCCCTTCCAATTTAGAAGCTCAAGTGAAGTCTGAGCCGGGACTTGATCACCACAAAGAAGTATTCAGTTCACAAGTTTCTGAACAGTTTAATATTTCTGATATGCAAAACAAGCTGCAGCAGAACTCTACTGATAGTTGTGCGGGGAATGCCCAGCATCTTTCTTTTCCAGATGGTCAGAACGAGTTATCTGTGACAACTACTCAAAACTCACAACAAATGTTGCACCCACATTCAGAGCCTGAAAATAATTTTAGTTGTCTTTCAGTTGGGACACAATCTAAATCGGCACTTATAAGTCAATGGAATTCTCAATCACAAGGTGTTAACCACATACCGGGAAATATGTCACATGAGCAGCATCTCCATATGGATTTCCATCAAAGAATATCGAGGCAAGATGAAGCTCAGTGCAATAATTTATCTTCCGATGGAAATGTTGTTAGTCAAGCTGTTGCTTCTAGAGGGGCTGAGCCACTTGATTCAAATGTTAATATTAAGAAAGCACATAGGAACCAACAAAGGTGGCTTTTATTTCTACTTCATGCTCGACGGTGTCCTGCCCCAGAAGGACGATGCCAAGAGAGATATTGTTATAGTGCTCAGAAGTTATGCAGGCACATTGATGGATGCAACCTCCCTCACTGCCCATATCCCCGCTGTCATCATACCAGGCTATTGCTAATTCATTTCAGAAACTGCAAGGATCCGTGTTGCCCAGTTTGTGTCTTTGTTCGAAATTACAGACGTTCACTTCAAGTTAAGCCTCAGACTCGGCCAGATTCTGAATCAGGAGGGCCTGTCGCAGTGAATGGATCTTGTAAACCCTACAATTCTGTAGTTCCATCACCTAGATTGATCTCAAAACCTTTGCCTGCTATTGAAACTTCAGATGACCTGCAGCCATCTCTAAAACGTATGAAAATTGAACAGTGTACCCAGTCCTTTAGTTCAGAAAATGACAACTCTACTGTGTCAGTTCTAGCTAACTGTGAATCTAATGTTTCCAAGGATGCCCAGAACCAAGACTATATCCATGGTGATATGCCAATGTCGGTTAAATCTGAGTTCACAGAGGTTAAGGCTGAGGGTCCAGTGCATTCAACACCCACAAATGCTTGTGAAGTGAAAATGAATAATGCGGAGGACAGATGGCCTGGTAGTGAACCTGTCACATATGATGAACCTGTCAATTTAGCTAGGCCAGAAAATATTAAACCTGAGAAAGAAACTGCACAAGATCAGCCAGAAAACCTTGCCCAGTCATCAGAAAATTTGGGAGGGACAAAGTCTGGTAAGCCTAAAATAAAGGGGGTCTCATTGACTGAACTATTCACTCCAGAGCAAGTCAGGGAACACATCACTGGCCTAAGACGATGGGTTGGCCAAAGCAAAGCAAAAGCAGAAAAGAATCAAGCAATGGAGCATGCAATGAGTGAGAACTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACATTTGAACCGCCACCTATATATTGCTCAACTTGTGGTGCTCGCATTAAACGAAATGCTATGTATCATACGATGGGTACTGGTGATACACGTCATTATTTTTGTATTCCGTGCTATAATGAGGCTCGTGGAGACACCATTTTTGTTGATGGAATTGCCATTCCTAAGGCAAGGCTGGAGAAAAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTCCAATGTGATAAATGTGAAGCTTGGCAACACCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGAGAGCGCAAACCCCTACCCCAAAGTGCTGTTCTTGGGGCCAAGGATTTGCCTAGAACAATTCTCAGTGATCACATAGAGCAACGGCTCTTTAAGAAACTAAAACAAGAGAGACAAGAGAGGGCAAGGCTTCAAGGGAAAAGTTATGATGAGGTGCCTGGGGCTGAAGCACTTGTTGTTAGAGTGGTGTCATCTGTGGACAAAAAATTAGAAGTGAAACAACGGTTTTTGGAAATTTTTCGGGAAGAAAATTATCCTACAGAATTCCCATATAAATCTAAGGTAATTTTGTTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTTTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGCCAGTTCCCTAATCAGCGTCGGGTATATCTGTCATATCTCGATTCTGTCAAGTATTTTAGGCCTGAAGTTAAAGCAATGACTGGGGAGGCTCTTCGGACGTTTGTTTATCATGAAATTTTGATTGGATACCTTGAATATTGTAAGAAACGTGGTTTTACAAGCTGCTATATTTGGGCCTGTCCTCCATTGAAGGGCGAAGATTATATTTTATATTGTCACCCGGAAATTCAGAAGACTCCAAAATCTGATAAACTTCGAGAATGGTACTTATCAATGTTAAGGAAAGCTGCCAAGGAGACTATTGTGGTTGATCTCACCAACTTGTATGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCTAAGGTTACTGCTTCAAGACTTCCTTATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAGGATCTGATTTATCAGCTTAACCAAGAAGAAGATGGCAGAAAATTGAATAAGAAAGGAACAACTAAAAAGACTATAACAAAGAGGGCTTTAAAGGCATCTGGTCAGTCAGATCTCTCTGGTAACGCGTCAAAAGATCTCCTTCTAATGCATAAGCTTGGCGAAACCATTAGCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCGTGCAGTCACTGTTGTATTTTAATGGTATCTGGCAACCGTTGGGTTTGCAACCAGTGCAAAAATTTTCAGATGTGTGACAAATGTTATGAAGCAGAACAGAAGCGCGAAGAAAGGGAAAGGCATCCTATCCATCATAGGGAGAAACATACCTTTCGCCCAATTGAAATTACTGATGTGCCAGCTGATACGAAGGACAAAGACGAGATTCTTGAAAGTGAATTCTTTGACACTAGACAGGCATTTCTCAGTCTCTGTCAGGGAAACCATTATCAGTATGATACTCTGAGGCGGGCCAAACATTCATCAATGATGGTCCTTTATCATCTTCATAATCCGACTGCTCCTGCCTTTGTGACAACTTGTAATATATGTCATCTTGACATTGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGACTATGATGTGTGCAATGCGTGTTATCAAAAGGATGGAGGTATTGATCATCCTCATAAGTTAACAAATCATCCGTCCTTGGCTGAGCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTGTTACAGTTGCGGAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGCCGTTCTGCCCATTGCCAGTATCCAAATTGTCGCAAAGTGAAGGGACTCTTCCGCCATGGGATGCAATGCAAAACACGTGCCTCTGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTGCAACTTCATGCTCGGGCTTGCAAAGAATCTGAGTGCCACGTGCCACGTTGCAGAGATCTGAAAGAACATTTAAGGAGGTTGCAGCAGCAGTCGGACTCTCGGCGAAGAGCAGCCGTGATGGAAATGATGAGACAGCGAGCTGCTGAAGTTGCCAACAATGCAGGATAA 5214 0.4279 MKLQAPIPGQMSGQVPNQSGSQLPGLTQPNRNALPQTPNLAGVPRSTINMDPEFLRARTIMQEKIYEILLQRQQHPVTELQKRRYKDFAKRLEEAMLKTATSKEEYLNLDTLESRLLNCIRRPSMNNHSQQYPQHVGSSPVGTMIPTPGMPHVVNSNMTATSSVDASMIVTPGCNSMASPSVNSGSMFPTGGLHGNSLSRSDALSNGYQPSSTSYSIGSGGTMSSMGAQRAGSQMIPTPGFTSSNNPYMNVESSDNSGVFSSVESSMVSQPQQQKQHVGGQNNNVMQNLGSQMGSGMRSGLQQKSFAYSNGAISSGLGLIGNNRQQTSESGFVDAYATTYTNSPKHPQQHFDQNQQLPGHGDGYGLNNVDSFASGNFYASATSSGSMMNSQNLNSVKLPAVSQTNTLISSHSNSNLHGMQQAAHLKSQAMNQLEKLNFQSSFTSREGLLDPQRQYLQHSQQFQQPEQYAQQQFEQSEQYAQKQYQLKLRSQQPQHLVNSGAFGQSHIPSNLEAQVKSEPGLDHHKEVFSSQVSEQFNISDMQNKLQQNSTDSCAGNAQHLSFPDGQNELSVTTTQNSQQMLHPHSEPENNFSCLSVGTQSKSALISQWNSQSQGVNHIPGNMSHEQHLHMDFHQRISRQDEAQCNNLSSDGNVVSQAVASRGAEPLDSNVNIKKAHRNQQRWLLFLLHARRCPAPEGRCQERYCYSAQKLCRHIDGCNLPHCPYPRCHHTRLLLIHFRNCKDPCCPVCVFVRNYRRSLQVKPQTRPDSESGGPVAVNGSCKPYNSVVPSPRLISKPLPAIETSDDLQPSLKRMKIEQCTQSFSSENDNSTVSVLANCESNVSKDAQNQDYIHGDMPMSVKSEFTEVKAEGPVHSTPTNACEVKMNNAEDRWPGSEPVTYDEPVNLARPENIKPEKETAQDQPENLAQSSENLGGTKSGKPKIKGVSLTELFTPEQVREHITGLRRWVGQSKAKAEKNQAMEHAMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYHTMGTGDTRHYFCIPCYNEARGDTIFVDGIAIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKKLKQERQERARLQGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFREENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAMTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKETIVVDLTNLYDHFFVSTGECRAKVTASRLPYFDGDYWPGAAEDLIYQLNQEEDGRKLNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQMCDKCYEAEQKREERERHPIHHREKHTFRPIEITDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPSLAERDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4517g00017 1737 SMART TAZ_2 1622 1700 IPR000197 -
Pral4517g00017 1737 SMART TAZ_2 673 751 IPR000197 -
Pral4517g00017 1737 SMART zz_5 1438 1482 IPR000433 GO:0008270
Pral4517g00017 1737 SMART zz_5 1558 1604 IPR000433 GO:0008270
Pral4517g00017 1737 PANTHER CBP/P300-RELATED 84 330 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00017 1737 Pfam Histone acetylation protein 1161 1377 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00017 1737 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1121 1557 IPR031162 GO:0004402
Pral4517g00017 1737 ProSiteProfiles Zinc finger TAZ-type profile. 1619 1702 IPR000197 -
Pral4517g00017 1737 Pfam Zinc finger, ZZ type 1561 1600 IPR000433 GO:0008270
Pral4517g00017 1737 SUPERFAMILY RING/U-box 1419 1498 - -
Pral4517g00017 1737 ProSitePatterns Zinc finger PHD-type signature. 1032 1103 IPR019786 -
Pral4517g00017 1737 FunFam Histone acetyltransferase of the CBP family 12 1435 1494 - -
Pral4517g00017 1737 SUPERFAMILY TAZ domain 675 755 IPR035898 -
Pral4517g00017 1737 Coils Coil 1137 1157 - -
Pral4517g00017 1737 CDD PHD_HAC_like 1031 1103 - -
Pral4517g00017 1737 ProSitePatterns Zinc finger ZZ-type signature. 1564 1591 IPR000433 GO:0008270
Pral4517g00017 1737 Gene3D TAZ domain 1616 1733 IPR035898 -
Pral4517g00017 1737 Gene3D TAZ domain 667 756 IPR035898 -
Pral4517g00017 1737 MobiDBLite consensus disorder prediction 201 233 - -
Pral4517g00017 1737 FunFam Histone acetyltransferase HAC1-like protein 1616 1733 - -
Pral4517g00017 1737 MobiDBLite consensus disorder prediction 913 941 - -
Pral4517g00017 1737 Pfam PHD-finger 1062 1104 IPR019787 -
Pral4517g00017 1737 FunFam Histone acetyltransferase HAC1 1558 1609 - -
Pral4517g00017 1737 MobiDBLite consensus disorder prediction 10 44 - -
Pral4517g00017 1737 Gene3D - 1558 1609 IPR043145 -
Pral4517g00017 1737 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1056 1104 IPR013083 -
Pral4517g00017 1737 MobiDBLite consensus disorder prediction 920 935 - -
Pral4517g00017 1737 Pfam TAZ zinc finger 680 748 IPR000197 -
Pral4517g00017 1737 Pfam TAZ zinc finger 1629 1699 IPR000197 -
Pral4517g00017 1737 Gene3D - 1435 1497 IPR043145 -
Pral4517g00017 1737 SUPERFAMILY FYVE/PHD zinc finger 1065 1105 IPR011011 -
Pral4517g00017 1737 MobiDBLite consensus disorder prediction 1 46 - -
Pral4517g00017 1737 ProSiteProfiles Zinc finger TAZ-type profile. 671 751 IPR000197 -
Pral4517g00017 1737 SUPERFAMILY TAZ domain 1621 1704 IPR035898 -
Pral4517g00017 1737 SMART KAT11_2 1154 1451 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00017 1737 ProSiteProfiles Zinc finger ZZ-type profile. 1439 1502 IPR000433 GO:0008270
Pral4517g00017 1737 ProSiteProfiles Zinc finger ZZ-type profile. 1559 1618 IPR000433 GO:0008270
Pral4517g00017 1737 SUPERFAMILY RING/U-box 1540 1608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4517g00017 Pral-Chr4517 177482 198013 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral4517g00017 HAT_KAT11 1.5e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4517g00017 K04498 - gmx:100809207 2718.34