Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4517g00016 ATGGAGCTGCAGGCGCACATTTCGGGCCAGGTACCTAATCAAGCAGGGTCTCAGTTGCCGGGACTGGCTCAGACAAATGGAAATGCTCTCCCTCCTCAGATACCAAATTTAGGTGGTATTCCACGTTCAACCATAAATACGGACCCTGAATTTCTCCGAGCACGTTTTCTCATGCAGGAAAAGATCAACGATATGCTATTGCAGCGGCAGCCGCATCCAGTTACTGAAAATAATAGAAGAAGGTGTAGGGATTTTGCTAAACGCCTGGAAGAGGGCATGTTAAGATCTGCACGCTCCAAGGAGGAGCACTTGAACATGGAAACATTAGAGAGCCGTTTGATGAACTGCATCAAACGATCATCTGCGAGTAATCATAACCAACAATATCCCCAGACTGTCAGCTCCTCTCAGGTTGGTACAATGATACCAACACCTGGCATGTCACATGTTGTGAGTTCAAGCATGGCCTCTACACCTTCCGTAGAGGTCCCAATGATTGCATCCAGTGGATATAATAGCATGCCATCTTCATCTATCAATAGCGGAAACATGTATCTGCATGGCAACTTGCATGGGAATTCCTTAAGGAGAGGTGATGTTATTTCAGGTTTTGCAAATGGCTATCAGCAGTCTTCTACTGGCTTTTCGGTTGGTTCTGGGGGGAACATGTCATCAATGGGTGTGCAGAGAAATGCAAATCAGATGATTCCCTCTCCTGGATTCACTAGCAGCAGTCACTCATACACGAACGTAGAATCTTCTAATAATAGCAATGTCTTTTCCAATGTTGATTCAACTATGGTATCACAGTCACAGCAGAAGCCGCATGTTGGTGGCCAAAACAATAATGTGATGCAAAATCTTGGTAACCAAATGGGTAGTGGAATGAGGTCTGGTTTACAACAAAAATCTTTTGCATACTCAAATGGAGCTATGACTAGTGGATTAGGCTCAGTTGGAAATAATATGCAAGCTGCAAATGAATCTGGAACTACTGACGGCTATGCCACAGCTTATGGTAACTCCCCTAAACAATTGCAGCAGCACTTTGATCAAAATCAGCAACCACCAGTGCAGAGTGATGGTTATGGATTGAATAATGTGGATTCATTTGCTTCTGGAAACTTTTATTCATCTGCAACATCTTCTGGATCTATCATGAGCAGCCAGAACATGAATTCTACAAAATTGCCTGTGATATCCAAAACCAACTCTCTGATTAATAGTCATTCGAGTTTGCATGGCATGCAGCAGGCCGCTCTTCTGAAGTCTCAAGCAGTTAATCAGTTGGACAAGGTGAATTTTCAGTCTTCTTCGACTTCAAGAGATGGCCTTTTGCATCATCAACAGCAATGTCAGCAGCGGCCTCAGCAATTTCAACAACCAGAACAGTATGTGCAGCAGCAATTTCAACTTAAGATGCATAGTCAGCAGCCTCAGCATTTGGTCAATAATGATGCTTTTAGCCGGTCTCAGGCAACATCCAACTTAGAAAGCAAGGTGAAGTCTGAGCCTGGAGTTGAGCATCATCAAGAAGTGCTTAATTCACAGGTTTCTGGACAGTTTCATATTTCAGGGATGCAAAATCAGTTTCGGCAGAAAACTGCTGAAGATTGCTCTAAGAATGCTCAACATCTTCCTTTGGCATCTGGTCAGAATGATTTTTCCACGAGGGCACCTCAGAATTCGCAAGAAATGCTTCACTCCCAACATTTGACTTCACAGTCTGGAAAAAATTTTAGCTGGCCTTCAGCTGGGACACAGTCTAATTCTGCATATGCAAATCAATGGAATTCTCAGCCGCATGATGTCAACCACATAACAGGGAATACATCACAAGAGCAGCTTGTCCAGTCTGATTTCCATCAACGGATATCAAGGCTAGATGAAGCTCAATGCAATAATTTGTCATCAGATCCATCGATTGTTGGGCAAGCTGTTGCTTCTAGAGGCTCAGCTGAGCCACAAGTCTTAGGTGTTGCTGTCAAAAAAGCACACAGGAACCAACAGAGGTGGCTTTTATTTCTGCTTCATGCTAGACGATGTCCTGCTCCTGAAGGACAATGCCAAGAGCGATATTGTTATAGTGCTCAGAAGTTGTGTAGGCACATAGAAGGATGTGAGTTAACTCACTGTTCGTATCCCCGCTGTCATCATACCAGGCTGTTGCTTCGTCATTTCAAAAACTGCAAGGATCCTTGTTGCCCTGTTTGTGTCTTTGTTCGCAATTATCGACATAAACTTAAGTCTCAGATTCAGCCAGGTAATAATTCAGGCATGCCAGTTGCTGTTAATGGATACTGCCAATCCTATGACACTGAAGCTCCATCACCTAGCTTGATCCCAAAGCCAGTACCTGTGATTGAAACTTCAGAAGACCTGCAGCCATCTCAAAAACGCATGAAGATTGAGCAGAGTATCCATTCCTTGAGTTCTAAGAATGACAACTCTGCTATATCATTTTCTGCAAAGTGTCATTCTGATGTTTCCAAGGTTGCTCAGTGTCAAGATTATGCCCATTGTGAGACTTCTATGCCAATTAAACCTGAGCTTACAGAGGTCAAGGAAGAAGTTCTGGTGCATTTGGCAAATGAGAAGCTTAGTGAAGTTAATGTAAGTAACATGGAAGGTGGAGGGCCTACTAATGAACCTGTCACATTTAATGATTCTGGGCCAGAAAATATTAAAACAGAGAAAGAAACTGGACAAGATAAACCAGTAAGTGTGACCCAGCCATCTGAAAATGCATCGAGTACCAAATCAGGTAAACCCACAATCAAGGGGGTCTCATTGATTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTTAGGCAATGGGTTGGCCAAAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAACATTTAATGAGCGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCGCCTCCAATTTATTGCTCAACTTGTGGTGCTCGCATTAAACGAAATGCTATGTATTATACTATGGGTGCTGGTGACACACGGCATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACAGCATTGTTGTTGATGGAAGTACCATTCCCAAGGGGAGGCTGGAGAAGAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGCGAAGCTTGGCAACATCAAATTTGTGCTTTATTTAATGGTCGGAGAAACGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGAGAGCGCAAACCTTTACCTCAAAGTGCTGTCCTTGGGGCCAAGGATCTGCCTAGAACGATTCTGAGTGACCACATAGAGCAACGGTTGTTTAGGAAACTAAAACAGGAGAGACAGGAGAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCCGAGTCACTTGTTATAAGAGTTGTGTCGTCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAATTTTTCAGGATGAAAATTACCCAACAGAATTCCCTTACAAATCAAAGGTAATTTTGTTGTTTCAGAAGATTGAAGGTGTGGAAGTATGCCTGTTTGGCATGTATGTGCAAGAATTTGGATCTGAATGCCAATTTCCTAATCAGCGACGAGTGTATCTTTCATATCTTGATTCTGTGAAGTATTTTCGTCCTGAGGTTAAAGCTGTGACTGGAGACGCCCTTCGGACATTTGTTTACCATGAAATTCTAATTGGATACCTTGATTATTGCAAGAAACGTGGTTTTACAAGCTGTTATATTTGGGCGTGTCCTCCGCTGAAGGGTGAAGATTATATATTGTATTGTCATCCAGAAATTCAGAAAACTCCAAAATCTGATAAGCTTCGGGAATGGTACCTAGCAATGCTAAGGAAAGCTGCCAAGGATGATATTGTGGTCGATCTCACAAACTTGTATGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCAAAGGTTACTGCTGCAAGACTTCCATATTTTGATGGGGACTACTGGCCAGGGGCCGCAGAGGATCTGATTTATCAGCTCCGTCAAGAGGAAGATGGCAGAAAACAGAATAAGAAAGGAACTACGAAAAAAACTATAACAAAAAGGGCTTTAAAGGCATCTGGTCAGACAGATCTTTCTGGAAATGCCTCGAAGGATCTACTCCTAATGCATAAACTTGGTGAAACCATTAGCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAACATGCTTGCAGCCACTGTTGCATTTTAATGGTGTCTGGCAACCGTTGGGTTTGTAACCAGTGCAAGAATTTTCAGATTTGTGACAAGTGTTACGAAGCAGAACAAAAACGTGAAGAAAGAGAAAGGCATCCTATAAATCAGAGGGAGAAACATGCTCTTAACCGAATTGAGATTATTGATGTACTGGCTGACACAAAGGACAAAGATGAGATCCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTCTGAGTCTCTGTCAAGGAAACCATTATCAATATGATACTCTCAGACGGGCCAAGCATTCATCAATGATGGTCCTATATCATCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACCTGTAACATCTGCTATCTTGACATAGAGACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCGGAGTATGATGTATGCAATGCTTGTTATCAAAAGGGAGGCATTGATCATCCACACAAGTTGACAAATCATCCATCACTGGCTGATCGTGATGCGCAAAACAAAGAAGCGAGACAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCGTCACAATGTCGTTCTCCACATTGCCAGTATCCCAATTGTCGAAAAGTGAAGGGGCTCTTCCGTCATGGAATTCAATGTAAAACACGTGCATCTGGGGGCTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGAGCTTGTAAAGAATCTGAGTGTCACGTACCACGATGCAGAGATTTGAAAGAACATTTAAGGAGGTTACAGCAGCAGTCTGAATCTCGGCGAAGAGCAGCTGTAAATGAGATGATGAGACAGAGAGCAGCAGAAGTTGCCAACAATGCAGGATGA 5163 0.4279 MELQAHISGQVPNQAGSQLPGLAQTNGNALPPQIPNLGGIPRSTINTDPEFLRARFLMQEKINDMLLQRQPHPVTENNRRRCRDFAKRLEEGMLRSARSKEEHLNMETLESRLMNCIKRSSASNHNQQYPQTVSSSQVGTMIPTPGMSHVVSSSMASTPSVEVPMIASSGYNSMPSSSINSGNMYLHGNLHGNSLRRGDVISGFANGYQQSSTGFSVGSGGNMSSMGVQRNANQMIPSPGFTSSSHSYTNVESSNNSNVFSNVDSTMVSQSQQKPHVGGQNNNVMQNLGNQMGSGMRSGLQQKSFAYSNGAMTSGLGSVGNNMQAANESGTTDGYATAYGNSPKQLQQHFDQNQQPPVQSDGYGLNNVDSFASGNFYSSATSSGSIMSSQNMNSTKLPVISKTNSLINSHSSLHGMQQAALLKSQAVNQLDKVNFQSSSTSRDGLLHHQQQCQQRPQQFQQPEQYVQQQFQLKMHSQQPQHLVNNDAFSRSQATSNLESKVKSEPGVEHHQEVLNSQVSGQFHISGMQNQFRQKTAEDCSKNAQHLPLASGQNDFSTRAPQNSQEMLHSQHLTSQSGKNFSWPSAGTQSNSAYANQWNSQPHDVNHITGNTSQEQLVQSDFHQRISRLDEAQCNNLSSDPSIVGQAVASRGSAEPQVLGVAVKKAHRNQQRWLLFLLHARRCPAPEGQCQERYCYSAQKLCRHIEGCELTHCSYPRCHHTRLLLRHFKNCKDPCCPVCVFVRNYRHKLKSQIQPGNNSGMPVAVNGYCQSYDTEAPSPSLIPKPVPVIETSEDLQPSQKRMKIEQSIHSLSSKNDNSAISFSAKCHSDVSKVAQCQDYAHCETSMPIKPELTEVKEEVLVHLANEKLSEVNVSNMEGGGPTNEPVTFNDSGPENIKTEKETGQDKPVSVTQPSENASSTKSGKPTIKGVSLIELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHLMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDSIVVDGSTIPKGRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRKLKQERQERARLQGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQDENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGDALRTFVYHEILIGYLDYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKDDIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQTDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERERHPINQREKHALNRIEIIDVLADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSESRRRAAVNEMMRQRAAEVANNAG 1720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4517g00016 1720 MobiDBLite consensus disorder prediction 535 600 - -
Pral4517g00016 1720 FunFam Histone acetyltransferase HAC1-like protein 1599 1716 - -
Pral4517g00016 1720 Coils Coil 1682 1702 - -
Pral4517g00016 1720 MobiDBLite consensus disorder prediction 870 892 - -
Pral4517g00016 1720 SUPERFAMILY FYVE/PHD zinc finger 1049 1089 IPR011011 -
Pral4517g00016 1720 SUPERFAMILY RING/U-box 1524 1590 - -
Pral4517g00016 1720 ProSiteProfiles Zinc finger ZZ-type profile. 1543 1595 IPR000433 GO:0008270
Pral4517g00016 1720 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1105 1541 IPR031162 GO:0004402
Pral4517g00016 1720 ProSiteProfiles Zinc finger TAZ-type profile. 660 741 IPR000197 -
Pral4517g00016 1720 ProSiteProfiles Zinc finger TAZ-type profile. 1602 1685 IPR000197 -
Pral4517g00016 1720 SUPERFAMILY TAZ domain 1604 1687 IPR035898 -
Pral4517g00016 1720 Coils Coil 1121 1141 - -
Pral4517g00016 1720 Pfam TAZ zinc finger 1612 1682 IPR000197 -
Pral4517g00016 1720 Pfam TAZ zinc finger 670 738 IPR000197 -
Pral4517g00016 1720 CDD PHD_HAC_like 1015 1087 - -
Pral4517g00016 1720 FunFam Histone acetyltransferase HAC1 1542 1592 - -
Pral4517g00016 1720 Pfam Zinc finger, ZZ type 1545 1586 IPR000433 GO:0008270
Pral4517g00016 1720 Gene3D TAZ domain 1599 1716 IPR035898 -
Pral4517g00016 1720 MobiDBLite consensus disorder prediction 1 42 - -
Pral4517g00016 1720 MobiDBLite consensus disorder prediction 904 924 - -
Pral4517g00016 1720 MobiDBLite consensus disorder prediction 7 32 - -
Pral4517g00016 1720 SUPERFAMILY TAZ domain 666 745 IPR035898 -
Pral4517g00016 1720 SMART zz_5 1422 1466 IPR000433 GO:0008270
Pral4517g00016 1720 SMART zz_5 1542 1587 IPR000433 GO:0008270
Pral4517g00016 1720 Gene3D - 1419 1477 IPR043145 -
Pral4517g00016 1720 Gene3D - 1542 1592 IPR043145 -
Pral4517g00016 1720 SUPERFAMILY RING/U-box 1403 1471 - -
Pral4517g00016 1720 MobiDBLite consensus disorder prediction 870 924 - -
Pral4517g00016 1720 Gene3D TAZ domain 659 747 IPR035898 -
Pral4517g00016 1720 FunFam Histone acetyltransferase of the CBP family 12 1419 1478 - -
Pral4517g00016 1720 SMART TAZ_2 1605 1683 IPR000197 -
Pral4517g00016 1720 SMART TAZ_2 663 741 IPR000197 -
Pral4517g00016 1720 Pfam Histone acetylation protein 1145 1364 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00016 1720 ProSitePatterns Zinc finger ZZ-type signature. 1548 1575 IPR000433 GO:0008270
Pral4517g00016 1720 Pfam PHD-finger 1046 1088 IPR019787 -
Pral4517g00016 1720 MobiDBLite consensus disorder prediction 545 600 - -
Pral4517g00016 1720 ProSiteProfiles Zinc finger ZZ-type profile. 1423 1486 IPR000433 GO:0008270
Pral4517g00016 1720 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1044 1088 IPR013083 -
Pral4517g00016 1720 SMART PHD_3 989 1088 IPR001965 -
Pral4517g00016 1720 PANTHER CBP/P300-RELATED 408 1711 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00016 1720 Gene3D - 983 1043 IPR038547 -
Pral4517g00016 1720 ProSitePatterns Zinc finger PHD-type signature. 1016 1087 IPR019786 -
Pral4517g00016 1720 SMART KAT11_2 1138 1435 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4517g00016 Pral-Chr4517 118192 131372 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral4517g00016 HAT_KAT11 8.8e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4517g00016 K04498 - gmx:100809207 2615.88