Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4517g00015 ATGGAGCTGCAGGCGCACATTTCGGGCCAGGTACCTAATCAAGCAGGGTCTCAGTTGCCGGGACTGGCTCAGACAAATGGAAATGCTCTCCCTCCTCAGATACCAAATTTAGGTGGTATTCCACGTTCAACCATAAATACGGACCCTGAATTTCTCCGAGCACGTTTTCTCATGCAGGAAAAGATCAACGATATGCTATTGCAGCGGCAGCCGCATCCAGTTACTGAAAATAATAGAAGAAGGTGTAGGGATTTTGCTAAACGCCTGGAAGAGGGCATGTTAAGATCTGCACGCTCCAAGGAGGAGCACTTGAACATGGAAACATTAGAGAGCCGTTTGATGAACTGCATCAAACGATCATCTGCGAGTAATCATAACCAACAATATCCCCAGACTGTCAGCTCCTCTCAGGTTGGTACAATGATACCAACACCTGGCATGTCACATGTTGTGAGTTCAAGCATGGCCTCTACACCTTCCGTAGAGGTCCCAATGATTGCATCCAGTGGATATAATAGCATGCCATCTTCATCTATCAATAGCGGAAACATGTATCTGCATGGCAACTTGCATGGGAATTCCTTAAGGAGAGGTGATGGTTTTGCAAATGGCTATCAGCAGTCTTCTACTGGCTTTTCGGTTGGTTCTGGGGGGAACATGTCATCAATGGGTGTGCAGAGAAATGCAAATCAGATGATTCCCTCTCCTGGATTCACTAGCAGCAGTCACTCATACACGAACGTAGAATCTTCTAATAATAGCAATGTCTTTTCCAATGTTGATTCAACTATGGTATCACAGTCACAGCAGAAGCCGCATGTTGGTGGCCAAAACAATAATGTGATGCAAAATCTTGGTAACCAAATGGGTAGTGGAATGAGGTCTGGTTTACAACAAAAATCTTTTGCATACTCAAATGGAGCTATGACTAGTGGATTAGGCTCAGTTGGAAATAATATGCAAGCTGCAAATGAATCTGGAACTACTGACGGCTATGCCACAGCTTATGGTAACTCCCCTAAACAATTGCAGCAGCACTTTGATCAAAATCAGCAACCACCAGTGCAGAGTGATGGTTATGGATTGAATAATGTGGATTCATTTGCTTCTGGAAACTTTTATTCATCTGCAACATCTTCTGGATCTATCATGAGCAGCCAGAACATGAATTCTACAAAATTGCCTGTGATATCCAAAACCAACTCTCTGATTAATAGTCATTCGAGTTTGCATGGCATGCAGCAGGCCGCTCTTCTGAAGTCTCAAGCAGTTAATCAGTTGGACAAGGTGAATTTTCAGTCTTCTTCGACTTCAAGAGATGGCCTTTTGCATCATCAACAGCAATGTCAGCAGCGGCCTCAGCAATTTCAACAACCAGAACAGTATGTGCAGCAGCAATTTCAACTTAAGATGCATAGTCAGCAGCCTCAGCATTTGGTCAATAATGATGCTTTTAGCCGGTCTCAGGCAACATCCAACTTAGAAAGCAAGGTGAAGTCTGAGCCTGGAGTTGAGCATCATCAAGAAGTGCTTAATTCACAGGTTTCTGGACAGTTTCATATTTCAGGGATGCAAAATCAGTTTCGGCAGAAAACTGCTGAAGATTGCTCTAAGAATGCTCAACATCTTCCTTTGGCATCTGGTCAGAATGATTTTTCCACGAGGGCACCTCAGAATTCGCAAGAAATGCTTCACTCCCAACATTTGACTTCACAGTCTGGAAAAAATTTTAGCTGGCCTTCAGCTGGGACACAGTCTAATTCTGCATATGCAAATCAATGGAATTCTCAGCCGCATGATGTCAACCACATAACAGGGAATACATCACAAGAGCAGCTTGTCCAGTCTGATTTCCATCAACGGATATCAAGGCTAGATGAAGCTCAATGCAATAATTTGTCATCAGATCCATCGATTGTTGGGCAAGCTGTTGCTTCTAGAGGCTCAGCTGAGCCACAAGTCTTAGGTGTTGCTGTCAAAAAAGCACACAGGAACCAACAGAGGTGGCTTTTATTTCTGCTTCATGCTAGACGATGTCCTGCTCCTGAAGGACAATGCCAAGAGCGATATTGTTATAGTGCTCAGAAGTTGTGTAGGCACATAGAAGGATGTGAGTTAACTCACTGTTCGTATCCCCGCTGTCATCATACCAGGCTGTTGCTTCGTCATTTCAAAAACTGCAAGGATCCTTGTTGCCCTGTTTGTGTCTTTGTTCGCAATTATCGACATAAACTTAAGTCTCAGATTCAGCCAGGTAATAATTCAGGCATGCCAGTTGCTGTTAATGGATACTGCCAATCCTATGACACTGAAGCTCCATCACCTAGCTTGATCCCAAAGCCAGTACCTGTGATTGAAACTTCAGAAGACCTGCAGCCATCTCAAAAACGCATGAAGATTGAGCAGAGTATCCATTCCTTGAGTTCTAAGAATGACAACTCTGCTATATCATTTTCTGCAAAGTGTCATTCTGATGTTTCCAAGGTTGCTCAGTGTCAAGATTATGCCCATTGTGAGACTTCTATGCCAATTAAACCTGAGCTTACAGAGGTCAAGGAAGAAGTTCTGGTGCATTTGGCAAATGAGAAGCTTAGTGAAGTTAATGTAAGTAACATGGAAGGTGGAGGGCCTACTAATGAACCTGTCACATTTAATGATTCTGGGCCAGAAAATATTAAAACAGAGAAAGAAACTGGACAAGATAAACCAGTAAGTGTGACCCAGCCATCTGAAAATGCATCGAGTACCAAATCAGGTAAACCCACAATCAAGGGGGTCTCATTGATTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTTAGGCAATGGGTTGGCCAAAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAACATTTAATGAGCGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCGCCTCCAATTTATTGCTCAACTTGTGGTGCTCGCATTAAACGAAATGCTATGTATTATACTATGGGTGCTGGTGACACACGGCATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACAGCATTGTTGTTGATGGAAGTACCATTCCCAAGGGGAGGCTGGAGAAGAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGCGAAGCTTGGCAACATCAAATTTGTGCTTTATTTAATGGTCGGAGAAACGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGAGAGCGCAAACCTTTACCTCAAAGTGCTGTCCTTGGGGCCAAGGATCTGCCTAGAACGATTCTGAGTGACCACATAGAGCAACGGTTGTTTAGGAAACTAAAACAGGAGAGACAGGAGAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCCGAGTCACTTGTTATAAGAGTTGTGTCGTCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAATTTTTCAGGATGAAAATTACCCAACAGAATTCCCTTACAAATCAAAGGTAATTTTGTTGTTTCAGAAGATTGAAGGTGTGGAAGTATGCCTGTTTGGCATGTATGTGCAAGAATTTGGATCTGAATGCCAATTTCCTAATCAGCGACGAGTGTATCTTTCATATCTTGATTCTGTGAAGTATTTTCGTCCTGAGGTTAAAGCTGTGACTGGAGACGCCCTTCGGACATTTGTTTACCATGAAATTCTAATTGGATACCTTGATTATTGCAAGAAACGTGGTTTTACAAGCTGTTATATTTGGGCGTGTCCTCCGCTGAAGGGTGAAGATTATATATTGTATTGTCATCCAGAAATTCAGAAAACTCCAAAATCTGATAAGCTTCGGGAATGGTACCTAGCAATGCTAAGGAAAGCTGCCAAGGATGATATTGTGGTCGATCTCACAAACTTGTATGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCAAAGGTTACTGCTGCAAGACTTCCATATTTTGATGGGGACTACTGGCCAGGGGCCGCAGAGGATCTGATTTATCAGCTCCGTCAAGAGGAAGATGGCAGAAAACAGAATAAGAAAGGAACTACGAAAAAAACTATAACAAAAAGGGCTTTAAAGGCATCTGGTCAGACAGATCTTTCTGGAAATGCCTCGAAGGATCTACTCCTAATGCATAAACTTGGTGAAACCATTAGCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAACATGCTTGCAGCCACTGTTGCATTTTAATGGTGTCTGGCAACCGTTGGGTTTGTAACCAGTGCAAGAATTTTCAGATTTGTGACAAGTGTTACGAAGCAGAACAAAAACGTGAAGAAAGAGAAAGGCATCCTATAAATCAGAGGGAGAAACATGCTCTTAACCGAATTGAGATTATTGATGTACTGGCTGACACAAAGGACAAAGATGAGATCCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTCTGAGTCTCTGTCAAGGAAACCATTATCAATATGATACTCTCAGACGGGCCAAGCATTCATCAATGATGGTCCTATATCATCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACCTGTAACATCTGCTATCTTGACATAGAGACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCGGAGTATGATGTATGCAATGCTTGTTATCAAAAGGGAGGCATTGATCATCCACACAAGTTGACAAATCATCCATCACTGGCTGATCGTGATGCGCAAAACAAAGAAGCGAGACAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCGTCACAATGTCGTTCTCCACATTGCCAGTATCCCAATTGTCGAAAAGTGAAGGGGCTCTTCCGTCATGGAATTCAATGTAAAACACGTGCATCTGGGGGCTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGAGCTTGTAAAGAATCTGAGTGTCACGTACCACGATGCAGAGATTTGAAAGAACATTTAAGGAGGTTACAGCAGCAGTCTGAATCTCGGCGAAGAGCAGCTGTAAATGAGATGATGAGACAGAGAGCAGCAGAAGTTGCCAACAATGCAGGATGA 5154 0.4282 MELQAHISGQVPNQAGSQLPGLAQTNGNALPPQIPNLGGIPRSTINTDPEFLRARFLMQEKINDMLLQRQPHPVTENNRRRCRDFAKRLEEGMLRSARSKEEHLNMETLESRLMNCIKRSSASNHNQQYPQTVSSSQVGTMIPTPGMSHVVSSSMASTPSVEVPMIASSGYNSMPSSSINSGNMYLHGNLHGNSLRRGDGFANGYQQSSTGFSVGSGGNMSSMGVQRNANQMIPSPGFTSSSHSYTNVESSNNSNVFSNVDSTMVSQSQQKPHVGGQNNNVMQNLGNQMGSGMRSGLQQKSFAYSNGAMTSGLGSVGNNMQAANESGTTDGYATAYGNSPKQLQQHFDQNQQPPVQSDGYGLNNVDSFASGNFYSSATSSGSIMSSQNMNSTKLPVISKTNSLINSHSSLHGMQQAALLKSQAVNQLDKVNFQSSSTSRDGLLHHQQQCQQRPQQFQQPEQYVQQQFQLKMHSQQPQHLVNNDAFSRSQATSNLESKVKSEPGVEHHQEVLNSQVSGQFHISGMQNQFRQKTAEDCSKNAQHLPLASGQNDFSTRAPQNSQEMLHSQHLTSQSGKNFSWPSAGTQSNSAYANQWNSQPHDVNHITGNTSQEQLVQSDFHQRISRLDEAQCNNLSSDPSIVGQAVASRGSAEPQVLGVAVKKAHRNQQRWLLFLLHARRCPAPEGQCQERYCYSAQKLCRHIEGCELTHCSYPRCHHTRLLLRHFKNCKDPCCPVCVFVRNYRHKLKSQIQPGNNSGMPVAVNGYCQSYDTEAPSPSLIPKPVPVIETSEDLQPSQKRMKIEQSIHSLSSKNDNSAISFSAKCHSDVSKVAQCQDYAHCETSMPIKPELTEVKEEVLVHLANEKLSEVNVSNMEGGGPTNEPVTFNDSGPENIKTEKETGQDKPVSVTQPSENASSTKSGKPTIKGVSLIELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHLMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDSIVVDGSTIPKGRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRKLKQERQERARLQGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQDENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGDALRTFVYHEILIGYLDYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKDDIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQTDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERERHPINQREKHALNRIEIIDVLADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSESRRRAAVNEMMRQRAAEVANNAG 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4517g00015 1717 CDD PHD_HAC_like 1012 1084 - -
Pral4517g00015 1717 Pfam PHD-finger 1043 1085 IPR019787 -
Pral4517g00015 1717 MobiDBLite consensus disorder prediction 867 889 - -
Pral4517g00015 1717 SUPERFAMILY TAZ domain 1601 1684 IPR035898 -
Pral4517g00015 1717 Coils Coil 1118 1138 - -
Pral4517g00015 1717 Coils Coil 1679 1699 - -
Pral4517g00015 1717 FunFam Histone acetyltransferase of the CBP family 12 1416 1475 - -
Pral4517g00015 1717 SMART zz_5 1539 1584 IPR000433 GO:0008270
Pral4517g00015 1717 SMART zz_5 1419 1463 IPR000433 GO:0008270
Pral4517g00015 1717 FunFam Histone acetyltransferase HAC1-like protein 1596 1713 - -
Pral4517g00015 1717 SUPERFAMILY FYVE/PHD zinc finger 1046 1086 IPR011011 -
Pral4517g00015 1717 PANTHER CBP/P300-RELATED 403 1708 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00015 1717 SUPERFAMILY RING/U-box 1400 1468 - -
Pral4517g00015 1717 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1102 1538 IPR031162 GO:0004402
Pral4517g00015 1717 Pfam Zinc finger, ZZ type 1542 1583 IPR000433 GO:0008270
Pral4517g00015 1717 ProSitePatterns Zinc finger PHD-type signature. 1013 1084 IPR019786 -
Pral4517g00015 1717 Pfam TAZ zinc finger 1609 1679 IPR000197 -
Pral4517g00015 1717 Pfam TAZ zinc finger 667 735 IPR000197 -
Pral4517g00015 1717 Gene3D TAZ domain 1596 1713 IPR035898 -
Pral4517g00015 1717 MobiDBLite consensus disorder prediction 7 32 - -
Pral4517g00015 1717 MobiDBLite consensus disorder prediction 867 921 - -
Pral4517g00015 1717 MobiDBLite consensus disorder prediction 1 42 - -
Pral4517g00015 1717 Pfam Histone acetylation protein 1142 1361 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00015 1717 SUPERFAMILY RING/U-box 1521 1587 - -
Pral4517g00015 1717 Gene3D - 1539 1589 IPR043145 -
Pral4517g00015 1717 FunFam Histone acetyltransferase HAC1 1539 1589 - -
Pral4517g00015 1717 ProSitePatterns Zinc finger ZZ-type signature. 1545 1572 IPR000433 GO:0008270
Pral4517g00015 1717 Gene3D TAZ domain 656 744 IPR035898 -
Pral4517g00015 1717 MobiDBLite consensus disorder prediction 542 597 - -
Pral4517g00015 1717 Gene3D - 1416 1474 IPR043145 -
Pral4517g00015 1717 Gene3D - 980 1040 IPR038547 -
Pral4517g00015 1717 SMART PHD_3 986 1085 IPR001965 -
Pral4517g00015 1717 SUPERFAMILY TAZ domain 663 742 IPR035898 -
Pral4517g00015 1717 ProSiteProfiles Zinc finger ZZ-type profile. 1420 1483 IPR000433 GO:0008270
Pral4517g00015 1717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1041 1085 IPR013083 -
Pral4517g00015 1717 SMART KAT11_2 1135 1432 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00015 1717 MobiDBLite consensus disorder prediction 531 597 - -
Pral4517g00015 1717 MobiDBLite consensus disorder prediction 901 921 - -
Pral4517g00015 1717 ProSiteProfiles Zinc finger TAZ-type profile. 657 738 IPR000197 -
Pral4517g00015 1717 ProSiteProfiles Zinc finger ZZ-type profile. 1540 1592 IPR000433 GO:0008270
Pral4517g00015 1717 ProSiteProfiles Zinc finger TAZ-type profile. 1599 1682 IPR000197 -
Pral4517g00015 1717 SMART TAZ_2 660 738 IPR000197 -
Pral4517g00015 1717 SMART TAZ_2 1602 1680 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4517g00015 Pral-Chr4517 118192 131372 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral4517g00015 HAT_KAT11 8.8e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4517g00015 K04498 - gmx:100809207 2621.27