Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4517g00014 ATGGAGCTGCAGGCGCACATTTCGGGCCAGGTACCTAATCAAGCAGGGTCTCAGTTGCCGGGACTGGCTCAGACAAATGGAAATGCTCTCCCTCCTCAGATACCAAATTTAGGTGGTATTCCACGTTCAACCATAAATACGGACCCTGAATTTCTCCGAGCACGTTTTCTCATGCAGGAAAAGATCAACGATATGCTATTGCAGCGGCAGCCGCATCCAGTTACTGAAAATAATAGAAGAAGGTGTAGGGATTTTGCTAAACGCCTGGAAGAGGGCATGTTAAGATCTGCACGCTCCAAGGAGGAGCACTTGAACATGGAAACATTAGAGAGCCGTTTGATGAACTGCATCAAACGATCATCTGCGAGTAATCATAACCAACAATATCCCCAGACTGTCAGCTCCTCTCAGGTTGGTACAATGATACCAACACCTGGCATGTCACATGTTGTGAGTTCAAGCATGGCCTCTACACCTTCCGTAGAGGTCCCAATGATTGCATCCAGTGGATATAATAGCATGCCATCTTCATCTATCAATAGCGGAAACATGTATCTGCATGGCAACTTGCATGGGAATTCCTTAAGGAGAGTTATTTCAGGTTTTGCAAATGGCTATCAGCAGTCTTCTACTGGCTTTTCGGTTGGTTCTGGGGGGAACATGTCATCAATGGGTGTGCAGAGAAATGCAAATCAGATGATTCCCTCTCCTGGATTCACTAGCAGCAGTCACTCATACACGAACGTAGAATCTTCTAATAATAGCAATGTCTTTTCCAATGTTGATTCAACTATGGTATCACAGTCACAGCAGAAGCCGCATGTTGGTGGCCAAAACAATAATGTGATGCAAAATCTTGGTAACCAAATGGGTAGTGGAATGAGGTCTGGTTTACAACAAAAATCTTTTGCATACTCAAATGGAGCTATGACTAGTGGATTAGGCTCAGTTGGAAATAATATGCAAGCTGCAAATGAATCTGGAACTACTGACGGCTATGCCACAGCTTATGGTAACTCCCCTAAACAATTGCAGCAGCACTTTGATCAAAATCAGCAACCACCAGTGCAGAGTGATGGTTATGGATTGAATAATGTGGATTCATTTGCTTCTGGAAACTTTTATTCATCTGCAACATCTTCTGGATCTATCATGAGCAGCCAGAACATGAATTCTACAAAATTGCCTGTGATATCCAAAACCAACTCTCTGATTAATAGTCATTCGAGTTTGCATGGCATGCAGCAGGCCGCTCTTCTGAAGTCTCAAGCAGTTAATCAGTTGGACAAGGTGAATTTTCAGTCTTCTTCGACTTCAAGAGATGGCCTTTTGCATCATCAACAGCAATGTCAGCAGCGGCCTCAGCAATTTCAACAACCAGAACAGTATGTGCAGCAGCAATTTCAACTTAAGATGCATAGTCAGCAGCCTCAGCATTTGGTCAATAATGATGCTTTTAGCCGGTCTCAGGCAACATCCAACTTAGAAAGCAAGGTGAAGTCTGAGCCTGGAGTTGAGCATCATCAAGAAGTGCTTAATTCACAGGTTTCTGGACAGTTTCATATTTCAGGGATGCAAAATCAGTTTCGGCAGAAAACTGCTGAAGATTGCTCTAAGAATGCTCAACATCTTCCTTTGGCATCTGGTCAGAATGATTTTTCCACGAGGGCACCTCAGAATTCGCAAGAAATGCTTCACTCCCAACATTTGACTTCACAGTCTGGAAAAAATTTTAGCTGGCCTTCAGCTGGGACACAGTCTAATTCTGCATATGCAAATCAATGGAATTCTCAGCCGCATGATGTCAACCACATAACAGGGAATACATCACAAGAGCAGCTTGTCCAGTCTGATTTCCATCAACGGATATCAAGGCTAGATGAAGCTCAATGCAATAATTTGTCATCAGATCCATCGATTGTTGGGCAAGCTGTTGCTTCTAGAGGCTCAGCTGAGCCACAAGTCTTAGGTGTTGCTGTCAAAAAAGCACACAGGAACCAACAGAGGTGGCTTTTATTTCTGCTTCATGCTAGACGATGTCCTGCTCCTGAAGGACAATGCCAAGAGCGATATTGTTATAGTGCTCAGAAGTTGTGTAGGCACATAGAAGGATGTGAGTTAACTCACTGTTCGTATCCCCGCTGTCATCATACCAGGCTGTTGCTTCGTCATTTCAAAAACTGCAAGGATCCTTGTTGCCCTGTTTGTGTCTTTGTTCGCAATTATCGACATAAACTTAAGTCTCAGATTCAGCCAGGTAATAATTCAGGCATGCCAGTTGCTGTTAATGGATACTGCCAATCCTATGACACTGAAGCTCCATCACCTAGCTTGATCCCAAAGCCAGTACCTGTGATTGAAACTTCAGAAGACCTGCAGCCATCTCAAAAACGCATGAAGATTGAGCAGAGTATCCATTCCTTGAGTTCTAAGAATGACAACTCTGCTATATCATTTTCTGCAAAGTGTCATTCTGATGTTTCCAAGGTTGCTCAGTGTCAAGATTATGCCCATTGTGAGACTTCTATGCCAATTAAACCTGAGCTTACAGAGGTCAAGGAAGAAGTTCTGGTGCATTTGGCAAATGAGAAGCTTAGTGAAGTTAATGTAAGTAACATGGAAGGTGGAGGGCCTACTAATGAACCTGTCACATTTAATGATTCTGGGCCAGAAAATATTAAAACAGAGAAAGAAACTGGACAAGATAAACCAGTAAGTGTGACCCAGCCATCTGAAAATGCATCGAGTACCAAATCAGGTAAACCCACAATCAAGGGGGTCTCATTGATTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTTAGGCAATGGGTTGGCCAAAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAACATTTAATGAGCGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCGCCTCCAATTTATTGCTCAACTTGTGGTGCTCGCATTAAACGAAATGCTATGTATTATACTATGGGTGCTGGTGACACACGGCATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACAGCATTGTTGTTGATGGAAGTACCATTCCCAAGGGGAGGCTGGAGAAGAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGCGAAGCTTGGCAACATCAAATTTGTGCTTTATTTAATGGTCGGAGAAACGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGAGAGCGCAAACCTTTACCTCAAAGTGCTGTCCTTGGGGCCAAGGATCTGCCTAGAACGATTCTGAGTGACCACATAGAGCAACGGTTGTTTAGGAAACTAAAACAGGAGAGACAGGAGAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCCGAGTCACTTGTTATAAGAGTTGTGTCGTCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAATTTTTCAGGATGAAAATTACCCAACAGAATTCCCTTACAAATCAAAGGTAATTTTGTTGTTTCAGAAGATTGAAGGTGTGGAAGTATGCCTGTTTGGCATGTATGTGCAAGAATTTGGATCTGAATGCCAATTTCCTAATCAGCGACGAGTGTATCTTTCATATCTTGATTCTGTGAAGTATTTTCGTCCTGAGGTTAAAGCTGTGACTGGAGACGCCCTTCGGACATTTGTTTACCATGAAATTCTAATTGGATACCTTGATTATTGCAAGAAACGTGGTTTTACAAGCTGTTATATTTGGGCGTGTCCTCCGCTGAAGGGTGAAGATTATATATTGTATTGTCATCCAGAAATTCAGAAAACTCCAAAATCTGATAAGCTTCGGGAATGGTACCTAGCAATGCTAAGGAAAGCTGCCAAGGATGATATTGTGGTCGATCTCACAAACTTGTATGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCAAAGGTTACTGCTGCAAGACTTCCATATTTTGATGGGGACTACTGGCCAGGGGCCGCAGAGGATCTGATTTATCAGCTCCGTCAAGAGGAAGATGGCAGAAAACAGAATAAGAAAGGAACTACGAAAAAAACTATAACAAAAAGGGCTTTAAAGGCATCTGGTCAGACAGATCTTTCTGGAAATGCCTCGAAGGATCTACTCCTAATGCATAAACTTGGTGAAACCATTAGCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAACATGCTTGCAGCCACTGTTGCATTTTAATGGTGTCTGGCAACCGTTGGGTTTGTAACCAGTGCAAGAATTTTCAGATTTGTGACAAGTGTTACGAAGCAGAACAAAAACGTGAAGAAAGAGAAAGGCATCCTATAAATCAGAGGGAGAAACATGCTCTTAACCGAATTGAGATTATTGATGTACTGGCTGACACAAAGGACAAAGATGAGATCCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTCTGAGTCTCTGTCAAGGAAACCATTATCAATATGATACTCTCAGACGGGCCAAGCATTCATCAATGATGGTCCTATATCATCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACCTGTAACATCTGCTATCTTGACATAGAGACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCGGAGTATGATGTATGCAATGCTTGTTATCAAAAGGGAGGCATTGATCATCCACACAAGTTGACAAATCATCCATCACTGGCTGATCGTGATGCGCAAAACAAAGAAGCGAGACAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCGTCACAATGTCGTTCTCCACATTGCCAGTATCCCAATTGTCGAAAAGTGAAGGGGCTCTTCCGTCATGGAATTCAATGTAAAACACGTGCATCTGGGGGCTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGAGCTTGTAAAGAATCTGAGTGTCACGTACCACGATGCAGAGATTTGAAAGAACATTTAAGGAGGTTACAGCAGCAGTCTGAATCTCGGCGAAGAGCAGCTGTAAATGAGATGATGAGACAGAGAGCAGCAGAAGTTGCCAACAATGCAGGATGA 5157 0.4278 MELQAHISGQVPNQAGSQLPGLAQTNGNALPPQIPNLGGIPRSTINTDPEFLRARFLMQEKINDMLLQRQPHPVTENNRRRCRDFAKRLEEGMLRSARSKEEHLNMETLESRLMNCIKRSSASNHNQQYPQTVSSSQVGTMIPTPGMSHVVSSSMASTPSVEVPMIASSGYNSMPSSSINSGNMYLHGNLHGNSLRRVISGFANGYQQSSTGFSVGSGGNMSSMGVQRNANQMIPSPGFTSSSHSYTNVESSNNSNVFSNVDSTMVSQSQQKPHVGGQNNNVMQNLGNQMGSGMRSGLQQKSFAYSNGAMTSGLGSVGNNMQAANESGTTDGYATAYGNSPKQLQQHFDQNQQPPVQSDGYGLNNVDSFASGNFYSSATSSGSIMSSQNMNSTKLPVISKTNSLINSHSSLHGMQQAALLKSQAVNQLDKVNFQSSSTSRDGLLHHQQQCQQRPQQFQQPEQYVQQQFQLKMHSQQPQHLVNNDAFSRSQATSNLESKVKSEPGVEHHQEVLNSQVSGQFHISGMQNQFRQKTAEDCSKNAQHLPLASGQNDFSTRAPQNSQEMLHSQHLTSQSGKNFSWPSAGTQSNSAYANQWNSQPHDVNHITGNTSQEQLVQSDFHQRISRLDEAQCNNLSSDPSIVGQAVASRGSAEPQVLGVAVKKAHRNQQRWLLFLLHARRCPAPEGQCQERYCYSAQKLCRHIEGCELTHCSYPRCHHTRLLLRHFKNCKDPCCPVCVFVRNYRHKLKSQIQPGNNSGMPVAVNGYCQSYDTEAPSPSLIPKPVPVIETSEDLQPSQKRMKIEQSIHSLSSKNDNSAISFSAKCHSDVSKVAQCQDYAHCETSMPIKPELTEVKEEVLVHLANEKLSEVNVSNMEGGGPTNEPVTFNDSGPENIKTEKETGQDKPVSVTQPSENASSTKSGKPTIKGVSLIELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHLMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDSIVVDGSTIPKGRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRKLKQERQERARLQGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQDENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGDALRTFVYHEILIGYLDYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKDDIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQTDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERERHPINQREKHALNRIEIIDVLADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSESRRRAAVNEMMRQRAAEVANNAG 1718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4517g00014 1718 SUPERFAMILY TAZ domain 664 743 IPR035898 -
Pral4517g00014 1718 SUPERFAMILY RING/U-box 1401 1469 - -
Pral4517g00014 1718 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1042 1086 IPR013083 -
Pral4517g00014 1718 MobiDBLite consensus disorder prediction 543 598 - -
Pral4517g00014 1718 Gene3D - 1540 1590 IPR043145 -
Pral4517g00014 1718 Gene3D TAZ domain 657 745 IPR035898 -
Pral4517g00014 1718 Pfam Histone acetylation protein 1143 1362 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00014 1718 FunFam Histone acetyltransferase HAC1 1540 1590 - -
Pral4517g00014 1718 SMART TAZ_2 661 739 IPR000197 -
Pral4517g00014 1718 SMART TAZ_2 1603 1681 IPR000197 -
Pral4517g00014 1718 MobiDBLite consensus disorder prediction 533 598 - -
Pral4517g00014 1718 MobiDBLite consensus disorder prediction 902 922 - -
Pral4517g00014 1718 SUPERFAMILY TAZ domain 1602 1685 IPR035898 -
Pral4517g00014 1718 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1103 1539 IPR031162 GO:0004402
Pral4517g00014 1718 SMART KAT11_2 1136 1433 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00014 1718 Pfam TAZ zinc finger 668 736 IPR000197 -
Pral4517g00014 1718 Pfam TAZ zinc finger 1610 1680 IPR000197 -
Pral4517g00014 1718 Coils Coil 1680 1700 - -
Pral4517g00014 1718 MobiDBLite consensus disorder prediction 868 922 - -
Pral4517g00014 1718 Gene3D TAZ domain 1597 1714 IPR035898 -
Pral4517g00014 1718 Pfam Zinc finger, ZZ type 1543 1584 IPR000433 GO:0008270
Pral4517g00014 1718 SMART PHD_3 987 1086 IPR001965 -
Pral4517g00014 1718 MobiDBLite consensus disorder prediction 7 32 - -
Pral4517g00014 1718 MobiDBLite consensus disorder prediction 1 42 - -
Pral4517g00014 1718 ProSiteProfiles Zinc finger ZZ-type profile. 1421 1484 IPR000433 GO:0008270
Pral4517g00014 1718 ProSiteProfiles Zinc finger TAZ-type profile. 1600 1683 IPR000197 -
Pral4517g00014 1718 Coils Coil 1119 1139 - -
Pral4517g00014 1718 ProSiteProfiles Zinc finger ZZ-type profile. 1541 1593 IPR000433 GO:0008270
Pral4517g00014 1718 SUPERFAMILY FYVE/PHD zinc finger 1047 1087 IPR011011 -
Pral4517g00014 1718 CDD PHD_HAC_like 1013 1085 - -
Pral4517g00014 1718 Pfam PHD-finger 1044 1086 IPR019787 -
Pral4517g00014 1718 SUPERFAMILY RING/U-box 1522 1588 - -
Pral4517g00014 1718 ProSitePatterns Zinc finger ZZ-type signature. 1546 1573 IPR000433 GO:0008270
Pral4517g00014 1718 ProSitePatterns Zinc finger PHD-type signature. 1014 1085 IPR019786 -
Pral4517g00014 1718 Gene3D - 1417 1475 IPR043145 -
Pral4517g00014 1718 SMART zz_5 1540 1585 IPR000433 GO:0008270
Pral4517g00014 1718 SMART zz_5 1420 1464 IPR000433 GO:0008270
Pral4517g00014 1718 FunFam Histone acetyltransferase of the CBP family 12 1417 1476 - -
Pral4517g00014 1718 MobiDBLite consensus disorder prediction 868 890 - -
Pral4517g00014 1718 Gene3D - 981 1041 IPR038547 -
Pral4517g00014 1718 PANTHER CBP/P300-RELATED 380 1709 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00014 1718 ProSiteProfiles Zinc finger TAZ-type profile. 658 739 IPR000197 -
Pral4517g00014 1718 FunFam Histone acetyltransferase HAC1-like protein 1597 1714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4517g00014 Pral-Chr4517 118192 131372 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral4517g00014 HAT_KAT11 8.8e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4517g00014 K04498 - gmx:100809207 2615.49