Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4517g00013 ATGGAGCTGCAGGCGCACATTTCGGGCCAGGTACCTAATCAAGCAGGGTCTCAGTTGCCGGGACTGGCTCAGACAAATGGAAATGCTCTCCCTCCTCAGATACCAAATTTAGGTGGTATTCCACGTTCAACCATAAATACGGACCCTGAATTTCTCCGAGCACGTTTTCTCATGCAGGAAAAGATCAACGATATGCTATTGCAGCGGCAGCCGCATCCAGTTACTGAAAATAATAGAAGAAGGTGTAGGGATTTTGCTAAACGCCTGGAAGAGGGCATGTTAAGATCTGCACGCTCCAAGGAGGAGCACTTGAACATGGAAACATTAGAGAGCCGTTTGATGAACTGCATCAAACGATCATCTGCGAGTAATCATAACCAACAATATCCCCAGACTGTCAGCTCCTCTCAGGTTGGTACAATGATACCAACACCTGGCATGTCACATGTTGTGAGTTCAAGCATGGCCTCTACACCTTCCGTAGAGGTCCCAATGATTGCATCCAGTGGATATAATAGCATGCCATCTTCATCTATCAATAGCGGAAACATGTATCTGCATGGCAACTTGCATGGGAATTCCTTAAGGAGAGGTTTTGCAAATGGCTATCAGCAGTCTTCTACTGGCTTTTCGGTTGGTTCTGGGGGGAACATGTCATCAATGGGTGTGCAGAGAAATGCAAATCAGATGATTCCCTCTCCTGGATTCACTAGCAGCAGTCACTCATACACGAACGTAGAATCTTCTAATAATAGCAATGTCTTTTCCAATGTTGATTCAACTATGGTATCACAGTCACAGCAGAAGCCGCATGTTGGTGGCCAAAACAATAATGTGATGCAAAATCTTGGTAACCAAATGGGTAGTGGAATGAGGTCTGGTTTACAACAAAAATCTTTTGCATACTCAAATGGAGCTATGACTAGTGGATTAGGCTCAGTTGGAAATAATATGCAAGCTGCAAATGAATCTGGAACTACTGACGGCTATGCCACAGCTTATGGTAACTCCCCTAAACAATTGCAGCAGCACTTTGATCAAAATCAGCAACCACCAGTGCAGAGTGATGGTTATGGATTGAATAATGTGGATTCATTTGCTTCTGGAAACTTTTATTCATCTGCAACATCTTCTGGATCTATCATGAGCAGCCAGAACATGAATTCTACAAAATTGCCTGTGATATCCAAAACCAACTCTCTGATTAATAGTCATTCGAGTTTGCATGGCATGCAGCAGGCCGCTCTTCTGAAGTCTCAAGCAGTTAATCAGTTGGACAAGGTGAATTTTCAGTCTTCTTCGACTTCAAGAGATGGCCTTTTGCATCATCAACAGCAATGTCAGCAGCGGCCTCAGCAATTTCAACAACCAGAACAGTATGTGCAGCAGCAATTTCAACTTAAGATGCATAGTCAGCAGCCTCAGCATTTGGTCAATAATGATGCTTTTAGCCGGTCTCAGGCAACATCCAACTTAGAAAGCAAGGTGAAGTCTGAGCCTGGAGTTGAGCATCATCAAGAAGTGCTTAATTCACAGGTTTCTGGACAGTTTCATATTTCAGGGATGCAAAATCAGTTTCGGCAGAAAACTGCTGAAGATTGCTCTAAGAATGCTCAACATCTTCCTTTGGCATCTGGTCAGAATGATTTTTCCACGAGGGCACCTCAGAATTCGCAAGAAATGCTTCACTCCCAACATTTGACTTCACAGTCTGGAAAAAATTTTAGCTGGCCTTCAGCTGGGACACAGTCTAATTCTGCATATGCAAATCAATGGAATTCTCAGCCGCATGATGTCAACCACATAACAGGGAATACATCACAAGAGCAGCTTGTCCAGTCTGATTTCCATCAACGGATATCAAGGCTAGATGAAGCTCAATGCAATAATTTGTCATCAGATCCATCGATTGTTGGGCAAGCTGTTGCTTCTAGAGGCTCAGCTGAGCCACAAGTCTTAGGTGTTGCTGTCAAAAAAGCACACAGGAACCAACAGAGGTGGCTTTTATTTCTGCTTCATGCTAGACGATGTCCTGCTCCTGAAGGACAATGCCAAGAGCGATATTGTTATAGTGCTCAGAAGTTGTGTAGGCACATAGAAGGATGTGAGTTAACTCACTGTTCGTATCCCCGCTGTCATCATACCAGGCTGTTGCTTCGTCATTTCAAAAACTGCAAGGATCCTTGTTGCCCTGTTTGTGTCTTTGTTCGCAATTATCGACATAAACTTAAGTCTCAGATTCAGCCAGGTAATAATTCAGGCATGCCAGTTGCTGTTAATGGATACTGCCAATCCTATGACACTGAAGCTCCATCACCTAGCTTGATCCCAAAGCCAGTACCTGTGATTGAAACTTCAGAAGACCTGCAGCCATCTCAAAAACGCATGAAGATTGAGCAGAGTATCCATTCCTTGAGTTCTAAGAATGACAACTCTGCTATATCATTTTCTGCAAAGTGTCATTCTGATGTTTCCAAGGTTGCTCAGTGTCAAGATTATGCCCATTGTGAGACTTCTATGCCAATTAAACCTGAGCTTACAGAGGTCAAGGAAGAAGTTCTGGTGCATTTGGCAAATGAGAAGCTTAGTGAAGTTAATGTAAGTAACATGGAAGGTGGAGGGCCTACTAATGAACCTGTCACATTTAATGATTCTGGGCCAGAAAATATTAAAACAGAGAAAGAAACTGGACAAGATAAACCAGTAAGTGTGACCCAGCCATCTGAAAATGCATCGAGTACCAAATCAGGTAAACCCACAATCAAGGGGGTCTCATTGATTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTTAGGCAATGGGTTGGCCAAAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAACATTTAATGAGCGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCGCCTCCAATTTATTGCTCAACTTGTGGTGCTCGCATTAAACGAAATGCTATGTATTATACTATGGGTGCTGGTGACACACGGCATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACAGCATTGTTGTTGATGGAAGTACCATTCCCAAGGGGAGGCTGGAGAAGAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGCGAAGCTTGGCAACATCAAATTTGTGCTTTATTTAATGGTCGGAGAAACGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGAGAGCGCAAACCTTTACCTCAAAGTGCTGTCCTTGGGGCCAAGGATCTGCCTAGAACGATTCTGAGTGACCACATAGAGCAACGGTTGTTTAGGAAACTAAAACAGGAGAGACAGGAGAGGGCAAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCCGAGTCACTTGTTATAAGAGTTGTGTCGTCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAATTTTTCAGGATGAAAATTACCCAACAGAATTCCCTTACAAATCAAAGGTAATTTTGTTGTTTCAGAAGATTGAAGGTGTGGAAGTATGCCTGTTTGGCATGTATGTGCAAGAATTTGGATCTGAATGCCAATTTCCTAATCAGCGACGAGTGTATCTTTCATATCTTGATTCTGTGAAGTATTTTCGTCCTGAGGTTAAAGCTGTGACTGGAGACGCCCTTCGGACATTTGTTTACCATGAAATTCTAATTGGATACCTTGATTATTGCAAGAAACGTGGTTTTACAAGCTGTTATATTTGGGCGTGTCCTCCGCTGAAGGGTGAAGATTATATATTGTATTGTCATCCAGAAATTCAGAAAACTCCAAAATCTGATAAGCTTCGGGAATGGTACCTAGCAATGCTAAGGAAAGCTGCCAAGGATGATATTGTGGTCGATCTCACAAACTTGTATGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCAAAGGTTACTGCTGCAAGACTTCCATATTTTGATGGGGACTACTGGCCAGGGGCCGCAGAGGATCTGATTTATCAGCTCCGTCAAGAGGAAGATGGCAGAAAACAGAATAAGAAAGGAACTACGAAAAAAACTATAACAAAAAGGGCTTTAAAGGCATCTGGTCAGACAGATCTTTCTGGAAATGCCTCGAAGGATCTACTCCTAATGCATAAACTTGGTGAAACCATTAGCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAACATGCTTGCAGCCACTGTTGCATTTTAATGGTGTCTGGCAACCGTTGGGTTTGTAACCAGTGCAAGAATTTTCAGATTTGTGACAAGTGTTACGAAGCAGAACAAAAACGTGAAGAAAGAGAAAGGCATCCTATAAATCAGAGGGAGAAACATGCTCTTAACCGAATTGAGATTATTGATGTACTGGCTGACACAAAGGACAAAGATGAGATCCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTCTGAGTCTCTGTCAAGGAAACCATTATCAATATGATACTCTCAGACGGGCCAAGCATTCATCAATGATGGTCCTATATCATCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACCTGTAACATCTGCTATCTTGACATAGAGACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCGGAGTATGATGTATGCAATGCTTGTTATCAAAAGGGAGGCATTGATCATCCACACAAGTTGACAAATCATCCATCACTGGCTGATCGTGATGCGCAAAACAAAGAAGCGAGACAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTTCTTGTGCATGCGTCACAATGTCGTTCTCCACATTGCCAGTATCCCAATTGTCGAAAAGTGAAGGGGCTCTTCCGTCATGGAATTCAATGTAAAACACGTGCATCTGGGGGCTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGAGCTTGTAAAGAATCTGAGTGTCACGTACCACGATGCAGAGATTTGAAAGAACATTTAAGGAGGTTACAGCAGCAGTCTGAATCTCGGCGAAGAGCAGCTGTAAATGAGATGATGAGACAGAGAGCAGCAGAAGTTGCCAACAATGCAGGATGA 5148 0.4281 MELQAHISGQVPNQAGSQLPGLAQTNGNALPPQIPNLGGIPRSTINTDPEFLRARFLMQEKINDMLLQRQPHPVTENNRRRCRDFAKRLEEGMLRSARSKEEHLNMETLESRLMNCIKRSSASNHNQQYPQTVSSSQVGTMIPTPGMSHVVSSSMASTPSVEVPMIASSGYNSMPSSSINSGNMYLHGNLHGNSLRRGFANGYQQSSTGFSVGSGGNMSSMGVQRNANQMIPSPGFTSSSHSYTNVESSNNSNVFSNVDSTMVSQSQQKPHVGGQNNNVMQNLGNQMGSGMRSGLQQKSFAYSNGAMTSGLGSVGNNMQAANESGTTDGYATAYGNSPKQLQQHFDQNQQPPVQSDGYGLNNVDSFASGNFYSSATSSGSIMSSQNMNSTKLPVISKTNSLINSHSSLHGMQQAALLKSQAVNQLDKVNFQSSSTSRDGLLHHQQQCQQRPQQFQQPEQYVQQQFQLKMHSQQPQHLVNNDAFSRSQATSNLESKVKSEPGVEHHQEVLNSQVSGQFHISGMQNQFRQKTAEDCSKNAQHLPLASGQNDFSTRAPQNSQEMLHSQHLTSQSGKNFSWPSAGTQSNSAYANQWNSQPHDVNHITGNTSQEQLVQSDFHQRISRLDEAQCNNLSSDPSIVGQAVASRGSAEPQVLGVAVKKAHRNQQRWLLFLLHARRCPAPEGQCQERYCYSAQKLCRHIEGCELTHCSYPRCHHTRLLLRHFKNCKDPCCPVCVFVRNYRHKLKSQIQPGNNSGMPVAVNGYCQSYDTEAPSPSLIPKPVPVIETSEDLQPSQKRMKIEQSIHSLSSKNDNSAISFSAKCHSDVSKVAQCQDYAHCETSMPIKPELTEVKEEVLVHLANEKLSEVNVSNMEGGGPTNEPVTFNDSGPENIKTEKETGQDKPVSVTQPSENASSTKSGKPTIKGVSLIELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHLMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDSIVVDGSTIPKGRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRKLKQERQERARLQGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQDENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGDALRTFVYHEILIGYLDYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKDDIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQTDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERERHPINQREKHALNRIEIIDVLADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSESRRRAAVNEMMRQRAAEVANNAG 1715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4517g00013 1715 SMART TAZ_2 658 736 IPR000197 -
Pral4517g00013 1715 SMART TAZ_2 1600 1678 IPR000197 -
Pral4517g00013 1715 ProSiteProfiles Zinc finger ZZ-type profile. 1418 1481 IPR000433 GO:0008270
Pral4517g00013 1715 SUPERFAMILY RING/U-box 1519 1585 - -
Pral4517g00013 1715 ProSiteProfiles Zinc finger TAZ-type profile. 1597 1680 IPR000197 -
Pral4517g00013 1715 FunFam Histone acetyltransferase HAC1 1537 1587 - -
Pral4517g00013 1715 Gene3D - 978 1038 IPR038547 -
Pral4517g00013 1715 SMART zz_5 1417 1461 IPR000433 GO:0008270
Pral4517g00013 1715 SMART zz_5 1537 1582 IPR000433 GO:0008270
Pral4517g00013 1715 MobiDBLite consensus disorder prediction 529 595 - -
Pral4517g00013 1715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1039 1083 IPR013083 -
Pral4517g00013 1715 ProSiteProfiles Zinc finger ZZ-type profile. 1538 1590 IPR000433 GO:0008270
Pral4517g00013 1715 ProSitePatterns Zinc finger PHD-type signature. 1011 1082 IPR019786 -
Pral4517g00013 1715 Pfam PHD-finger 1041 1083 IPR019787 -
Pral4517g00013 1715 CDD PHD_HAC_like 1010 1082 - -
Pral4517g00013 1715 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1100 1536 IPR031162 GO:0004402
Pral4517g00013 1715 MobiDBLite consensus disorder prediction 865 919 - -
Pral4517g00013 1715 SMART PHD_3 984 1083 IPR001965 -
Pral4517g00013 1715 Gene3D TAZ domain 1594 1711 IPR035898 -
Pral4517g00013 1715 Pfam Histone acetylation protein 1140 1359 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00013 1715 SUPERFAMILY FYVE/PHD zinc finger 1044 1084 IPR011011 -
Pral4517g00013 1715 SMART KAT11_2 1133 1430 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00013 1715 SUPERFAMILY RING/U-box 1398 1466 - -
Pral4517g00013 1715 Coils Coil 1116 1136 - -
Pral4517g00013 1715 Coils Coil 1677 1697 - -
Pral4517g00013 1715 Pfam Zinc finger, ZZ type 1540 1581 IPR000433 GO:0008270
Pral4517g00013 1715 SUPERFAMILY TAZ domain 1599 1682 IPR035898 -
Pral4517g00013 1715 MobiDBLite consensus disorder prediction 1 42 - -
Pral4517g00013 1715 MobiDBLite consensus disorder prediction 7 32 - -
Pral4517g00013 1715 Pfam TAZ zinc finger 665 733 IPR000197 -
Pral4517g00013 1715 Pfam TAZ zinc finger 1607 1677 IPR000197 -
Pral4517g00013 1715 ProSiteProfiles Zinc finger TAZ-type profile. 655 736 IPR000197 -
Pral4517g00013 1715 MobiDBLite consensus disorder prediction 899 919 - -
Pral4517g00013 1715 Gene3D TAZ domain 654 742 IPR035898 -
Pral4517g00013 1715 Gene3D - 1414 1472 IPR043145 -
Pral4517g00013 1715 PANTHER CBP/P300-RELATED 403 1706 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pral4517g00013 1715 MobiDBLite consensus disorder prediction 865 887 - -
Pral4517g00013 1715 FunFam Histone acetyltransferase of the CBP family 12 1414 1473 - -
Pral4517g00013 1715 Gene3D - 1537 1587 IPR043145 -
Pral4517g00013 1715 SUPERFAMILY TAZ domain 661 740 IPR035898 -
Pral4517g00013 1715 ProSitePatterns Zinc finger ZZ-type signature. 1543 1570 IPR000433 GO:0008270
Pral4517g00013 1715 FunFam Histone acetyltransferase HAC1-like protein 1594 1711 - -
Pral4517g00013 1715 MobiDBLite consensus disorder prediction 540 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4517g00013 Pral-Chr4517 118192 131372 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral4517g00013 HAT_KAT11 8.5e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4517g00013 K04498 - gmx:100809207 2615.11