Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4514g00008 ATGAGGAAGCCTTGCTGTGATAAGCAAGACATGAACAAAGGAGCTTGGTCTAAACAAGAAGACCAGAAGCTTATTGATTACATCAAGAAACATGGCGAGGGTTGCTGGCGCACTCTTCCTCAAGCTGCAGGCTTACTTCGCTGCGGCAAAAGTTGCAGGCTGAGGTGGATAAATTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAGGAAGATCTCATCATCAAGCTTCATGCCCTGCTTGGCAACCGTTGGTCTCTGATAGCTGGAAGATTACCCGGAAGGACAGACAATGAAGTGAAAAATTACTGGAACTCTCACCTGAGAAGGAAGCTCATCAACATGGGAATCGACCCAAATAATCACAGACTGAGTCACAAATTTCCTTCTCTTCAAAATCAAACAACGTCTGGTAGCTCAGAATCATCAGGCTTGAAATTACCCAAAGATGCCAAGAAGAAGAAGAAGAACAACATTAAGCCAACAAATAAGCCTAAAACTGGTGGTAGTGGTGGCGACATTAATAATTATGAACAAGTTTCAGATGCTGCAAGTGGCTTGGAAGATGAGTCCTCTAGCTTGCCTGATCTAAACCTTGATCTCACAATCAACATTCCTTCAACCATACCCGCTAGTTCTGCTTATGAAGACGACCAAAAGCCGATTCATCATCATGAATCGAAGTCACCAAGGCCTACGCAATTAGCATCCTGCTCTCCAACCCTACTTCTGTTTCAGTGA 750 0.4387 MRKPCCDKQDMNKGAWSKQEDQKLIDYIKKHGEGCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINMGIDPNNHRLSHKFPSLQNQTTSGSSESSGLKLPKDAKKKKKNNIKPTNKPKTGGSGGDINNYEQVSDAASGLEDESSSLPDLNLDLTINIPSTIPASSAYEDDQKPIHHHESKSPRPTQLASCSPTLLLFQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4514g00008 249 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Pral4514g00008 249 FunFam Transcription repressor MYB4 68 134 - -
Pral4514g00008 249 Gene3D - 68 115 - -
Pral4514g00008 249 SMART sant 12 62 IPR001005 -
Pral4514g00008 249 SMART sant 65 113 IPR001005 -
Pral4514g00008 249 MobiDBLite consensus disorder prediction 126 180 - -
Pral4514g00008 249 CDD SANT 68 111 IPR001005 -
Pral4514g00008 249 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 192 - -
Pral4514g00008 249 CDD SANT 15 60 IPR001005 -
Pral4514g00008 249 MobiDBLite consensus disorder prediction 128 147 - -
Pral4514g00008 249 MobiDBLite consensus disorder prediction 213 242 - -
Pral4514g00008 249 Gene3D - 13 65 - -
Pral4514g00008 249 FunFam MYB-related transcription factor 12 65 - -
Pral4514g00008 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Pral4514g00008 249 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pral4514g00008 249 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pral4514g00008 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pral4514g00008 249 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Pral4514g00008 249 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Pral4514g00008 249 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4514g00008 Pral-Chr4514 75607 77873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4514g00008 2 212 MYB Transcription Factor Family AT4G38620 55.505 7.36e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4514g00008 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4514g00008 K09422 - jre:109008155 336.65