Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00066 ATGGAGATTGGTAGGGGAGGGTCGTCGTTCTCTTATTATACCATTCTTGGTATTAGTTCAGATTCAACCAGTACAGAAATAAGGAGAGCTTATCGCAAGCTTGCTCTGCAATGGCATCCAGACAGGTGGACAAGAACGCCTTCTTTGTTGAGTGAAGCCAAACAGAAATTTCAACAAATTCAAGAAGCTTATTCAGTTCTATCAGACCACAAGAAAAGAACAGTGTACGATGCAGGGTTATATGATCCTGAAGACGAAGATGAGGGATTTTCTGAATTTATGGAAGAGATGGTGTCTCTCATGGCTCAAGTGAGGAGGGAGGAAAAGGATTATTACAGTATGGAGGAGTTACAGAGCATGTTTACTGAGATGGCTCAAGATTTCAATCAGTCACCTTCATGGCGTTGCGGCGCCTCCGTTATTGATGAGTCCCCTCAATCCGCAAAGAGGATCCGTTTGGAAAAACATGGGAGAACCTAA 480 0.4333 MEIGRGGSSFSYYTILGISSDSTSTEIRRAYRKLALQWHPDRWTRTPSLLSEAKQKFQQIQEAYSVLSDHKKRTVYDAGLYDPEDEDEGFSEFMEEMVSLMAQVRREEKDYYSMEELQSMFTEMAQDFNQSPSWRCGASVIDESPQSAKRIRLEKHGRT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00066 159 Pfam DnaJ domain 12 77 IPR001623 -
Pral4512g00066 159 SMART dnaj_3 10 72 IPR001623 -
Pral4512g00066 159 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pral4512g00066 159 CDD DnaJ 12 69 IPR001623 -
Pral4512g00066 159 PRINTS DnaJ domain signature 149 159 IPR001623 -
Pral4512g00066 159 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pral4512g00066 159 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pral4512g00066 159 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pral4512g00066 159 SUPERFAMILY Chaperone J-domain 9 87 IPR036869 -
Pral4512g00066 159 Gene3D DnaJ domain 7 125 IPR036869 -
Pral4512g00066 159 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Pral4512g00066 159 PANTHER PUTATIVE, EXPRESSED-RELATED 9 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00066 Pral-Chr4512 461408 463273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00066 12 78 C2H2 Transcription Factor Family AT1G74250 48.529 3.46e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00066 - - qsu:112022247 202.216