Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00053 ATGGATTCAACAGCGAGATCCAACTCTGTCACACTCCTCATCTTCATCTTCTTCCTACTCCTCAATGACCCTGCTTCTTCTTCAAATCCAACTACTTCCTTCCCAAAACAAGCCTTGCCCACAAAATCTGGCTACCTCCCTGTCAACCCCACCTCCAAATCCGCCATTTTCTACGCTTTCTATGAAGCCCAGAACTCCACTCCGCCTCTCTCCCAGACCCCACTTCTCATCTGGCTCCAAGGCGGCCCTGGCTGCTCCTCCATGATCAGCAACTTCTTCGAGCTTGGACCATGGCGCGTCACCAAATCCTTGAATCTAATTTCCAATCCTGGTTCTTGGAACAGAATTTTTGGCCTTCTATTCCTCGATAACCCAATCGGAACTGGATTCAGTATCGCCTCAAACTCTGAGGAAATTCCCCGAGACCAAAATTCTGTGGCCAAACACCTCTTCACTGCTATAGCCAAGTTCATTCAGCTTAACCCCGCTTTCAAGGATCGCCCAATCTATATAACCGGCGAGAGCTATGCTGGGAAGTATGTTCCTGCAATTGGATATTACATATTACAAAGGAATTCACGTTTGAATGCTTCCCAGAGGGTGAATTTAGCAGGTGTGGCGATTGGAGACGGGTTAACTCACCCAGTGGCACAAGTTACTACTCATGCTGTGAATGCTTATTTCTTAGGGTTGATCAACGAGAGGCAGAAGAATGACTTGGAGAAGGCTCAATTTGAAGCCGTCAGATTGACCAAACAGGGGAATTGGAGCGCAGCAAGAGATGCGAGAAACAATGTTTTCAGATTGTTGCATAACATGACAGGGTTGGCTACTTCATTCGACTTCACAAGAAAAGCTCCTTATGAAAGTAACTTGGTCACTGATTTCTTGAAATCCAGCGACGTGAAGAAGGCACTAGGGGTGAGAGAGTCTCTTGTTTTTGAAGGATGTAGTGATACCGTAAAAGCTGCATTACAGAAGGATGTGATGAAAAGTGTAGAGTACATGGTGGAATACTTGGTGACAAAAACCAGAGTGCTTCTATATCAAGGCCAGCATGATCTGAGAGATGGTCCGGTTCAAGTAGAAGCATGGGTTAAGACACTGAAATGGGAGGGAATTGAGAAGTATTTGAATGCAGATAGAAAGATATGGAAAGTGAATGGCCACCTTGCTGGGTATGTGCAAAAATGGCAGAGCCTCACTAATGTTTTGGTTTTGGGAGCTGGTCATTATTTGCCTGCTGATCAAGCCGTGAACTCTCAAGTCATGATTGAAAACTGGGTATTGCAGAAGGATTTGTTTGAGCATGATCAACAGGAGAATGTTTAG 1332 0.4527 MDSTARSNSVTLLIFIFFLLLNDPASSSNPTTSFPKQALPTKSGYLPVNPTSKSAIFYAFYEAQNSTPPLSQTPLLIWLQGGPGCSSMISNFFELGPWRVTKSLNLISNPGSWNRIFGLLFLDNPIGTGFSIASNSEEIPRDQNSVAKHLFTAIAKFIQLNPAFKDRPIYITGESYAGKYVPAIGYYILQRNSRLNASQRVNLAGVAIGDGLTHPVAQVTTHAVNAYFLGLINERQKNDLEKAQFEAVRLTKQGNWSAARDARNNVFRLLHNMTGLATSFDFTRKAPYESNLVTDFLKSSDVKKALGVRESLVFEGCSDTVKAALQKDVMKSVEYMVEYLVTKTRVLLYQGQHDLRDGPVQVEAWVKTLKWEGIEKYLNADRKIWKVNGHLAGYVQKWQSLTNVLVLGAGHYLPADQAVNSQVMIENWVLQKDLFEHDQQENV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00053 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Pral4512g00053 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Pral4512g00053 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 401 414 IPR001563 GO:0004185|GO:0006508
Pral4512g00053 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Pral4512g00053 443 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 417 IPR001563 GO:0004185|GO:0006508
Pral4512g00053 443 Gene3D alpha/beta hydrolase 23 443 IPR029058 -
Pral4512g00053 443 FunFam Carboxypeptidase 25 436 - -
Pral4512g00053 443 SUPERFAMILY alpha/beta-Hydrolases 40 432 IPR029058 -
Pral4512g00053 443 Pfam Serine carboxypeptidase 37 430 IPR001563 GO:0004185|GO:0006508
Pral4512g00053 443 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Pral4512g00053 443 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00053 Pral-Chr4512 375756 377828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00053 302 434 Calmodulin-binding Proteins AT2G22960 25.547 4.84e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00053 K09645 - gmx:102663282 632.098