Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00052 ATGGAGTCAACAAGAACCAATTCTCTTGTGATCTTCCTCCTCTCCACTCTTGCCTTCTGCTTAAATCACAACTATGTTTCTTCTTCTTCGTCCCCAGATCCATCCCCTTTGTTCCCCCAACAAACGCTACCCACAAAATCTGGCTACCTCCCTGTCAGCCATGCTTCCAATTCTGCCATTTTCTACACTTTCTACGAAGCTCAGCATCTCACTTCACCTCTATCCCAAACCCCACTTCTCATCTGGCTCCAAGGCGGCCCTGGCTGCTCCTCCATGATCGGTAACTTCTTCGAGCTCGGTCCATGGCGCGTCACCAAATCCCTAACTCTCAAACCCAATCCTGCCTCGTGGAACAGAATCTTCGGCCTACTTTTCCTCGATAACCCAATCGGTACTGGATTCAGTGTGGCCTCGGATCCTCAAGAAATCCCAAGAGACCAGAAATCTGTTGCCAAACACCTCTTTGCTGCCATTACTAAGTTCATTCAACTTGATCCTGTTTTCAAGTACCGACCAATTTATATAACCGGAGAAAGCTACGCTGGGAAGTATGTTCCTGCAATTGGGTATTACATACTACACAGGAATTCTCGATCGAATGTTTCACAGAGAGTGAATTTGGCAGGTGTGGCAATTGGGGATGGGCTGATTGATCCAGTGACACAAGTTGCTACCCATGCTAAGAATGCTTACTATATTGGATTGATCAATGAGAGGCAGAAGAATGAGGTGGAGAAGGCTCTGTCAGAGGCGATCAGATTGACCAAATTGGGGAATTGGAGTGCAGCAACAGATGCTAGAAGCAATGCTTTGAGTCTGTTGCAGAACATGACTGGTTTAGCTACTTTGTATGACTACACAAAGAAAGCTCCTTATGAGAGCAATTTGGTCACTGAGTTCTTGAAATCCAGTGAGGTGAAGAAGGCACTAGGGGTGAATGAATCTGCTGTGTTTGAAGGTTGTAGTGATGCTGTTCTAGCTATATTATATGAGGACTTAATGAAGAGTGTGAAGTATATGGTGGAGTACTTGGTGAAGAGGACTAGGGTGCTTCTATACCAAGGGCAATATGACTTGAAGTTAGGGGTGCCTCCCAGCGAGGCATGGGTGAAGACAATGAAATGGGAAGGGATTGAGAAGTATTTGAATGCAGAGAGAAAGATCTGGAAAGTGAATAAAGTTCCAGTAGGATATGTCCAACAATGGGGAAGCTTCACAAGTGTTGTGGTTTTGGGTGGTGGCCATCTTTTGCCAGCTGATCAACCTCTGAACTCTCAAATGATGATAGAAGACTGGGTTTTGGAGAGGAATATGTTTGAATATGAGAAACAAGGAATAGTTTCTGTGATTTAG 1353 0.4494 MESTRTNSLVIFLLSTLAFCLNHNYVSSSSSPDPSPLFPQQTLPTKSGYLPVSHASNSAIFYTFYEAQHLTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTKSLTLKPNPASWNRIFGLLFLDNPIGTGFSVASDPQEIPRDQKSVAKHLFAAITKFIQLDPVFKYRPIYITGESYAGKYVPAIGYYILHRNSRSNVSQRVNLAGVAIGDGLIDPVTQVATHAKNAYYIGLINERQKNEVEKALSEAIRLTKLGNWSAATDARSNALSLLQNMTGLATLYDYTKKAPYESNLVTEFLKSSEVKKALGVNESAVFEGCSDAVLAILYEDLMKSVKYMVEYLVKRTRVLLYQGQYDLKLGVPPSEAWVKTMKWEGIEKYLNAERKIWKVNKVPVGYVQQWGSFTSVVVLGGGHLLPADQPLNSQMMIEDWVLERNMFEYEKQGIVSVI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00052 450 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Pral4512g00052 450 SUPERFAMILY alpha/beta-Hydrolases 43 433 IPR029058 -
Pral4512g00052 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Pral4512g00052 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 405 418 IPR001563 GO:0004185|GO:0006508
Pral4512g00052 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Pral4512g00052 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Pral4512g00052 450 Gene3D alpha/beta hydrolase 32 449 IPR029058 -
Pral4512g00052 450 Pfam Serine carboxypeptidase 42 433 IPR001563 GO:0004185|GO:0006508
Pral4512g00052 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 422 IPR001563 GO:0004185|GO:0006508
Pral4512g00052 450 FunFam Carboxypeptidase 29 440 - -
Pral4512g00052 450 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00052 Pral-Chr4512 370753 372364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00052 331 433 Calmodulin-binding Proteins AT2G22960 24.038 6.58e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00052 K09645 - gmx:100780822 629.402