Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00047 ATGATATTGGAGATTCTTGTTCGCTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAACCAGATCTTCATCATGCGCAGAATTAATAACAGCTTCGTTTCATCATTTAGAGAAGCCATCTACAAGGTGAAATGCAGAAGCGAGTCTCCTGATGGACATTTGGGTTCTTCCTTTCAACAAGATGAAGCACAAACAGACAATTGTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGAAGAAGCAACAATCAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGATCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGGGGGCTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAGCGTGCATCTACAACAGTCACTAATGGCAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACGTACATGGTGCTGAGGGGAACAAATAGGAAAACAGTTGGAACAGAAGCATTAAAGATGGGGGTGTGTGGCCCTTGGATCACCAAGTCATACCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTCAGTACACCACCACTTGTGTCTAATACACCTGGGTCTGGTAATCAAGAAAGAGAAATTGTTGCACCAAAGCCAATTCGAGTTACCCCTGACCTTGTAACTGGAATTGAGGAATTGTCGCAGCCATGGACTCGATCCCCGAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTAGCACTGACAACACAGCACTAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGAGTAAAGGATTTTAAATACGATAACTTCAGCTCACTTGATCTGGCTTTGTTATCAAAGAATATTGATGACATACGAAATGTTCGGAGAACAAAAGTTCCTATATTTGACCTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACCTGTGGATTGCTGTGGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGATAAGGGTAGAGTGGGATATTTTATGTCCCAAAATGAGATTATGATGACAGTATTTCCCATGTTCCAGCAGCACATTGAACCACATCTTGTCCATGCACATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAAAGTAATAAAAAGGTTGCTTATCAAGATATTCTTATGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATATATATTTAAAGCTTCCCGGGATCCCCTCTAATGGACAGTTGACCGAGGGTGATTGTATAAGGGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAACCGAAAGTGGATTTTGATATTGGCATTAGTACGGTTGCAGGTCTTCTCAATCTGGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAGGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGTGTTGATAAGGATGCTGTTGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGTGGCATCCACTCTCAGCAATCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTTAGCATCAGAATGCTCACCAAGAAGAGTGGCGTCCCCAATGGAAGGGATTATCGAGGAGATGCAATCCAGGATTAGAAGGCTAGAACGGTGGCTTGCTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTCGTGGGTTATTCACTATATCAAAGGAAGCGTCAATGA 2289 0.412 MILEILVRWITLLTVFSHCFGSTLNQIFIMRRINNSFVSSFREAIYKVKCRSESPDGHLGSSFQQDEAQTDNCIEMYLRPPSASEEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVTNGNVSVSFETIDALGETYMVLRGTNRKTVGTEALKMGVCGPWITKSYLEMILERKGVPRLSTPPLVSNTPGSGNQEREIVAPKPIRVTPDLVTGIEELSQPWTRSPRKSKMEPVIATWRFISSDSSSTDNTALDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKGRVGYFMSQNEIMMTVFPMFQQHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILMILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDGSYTTKSYLQIILENLPALERTFGGIHSQQSARMQEIVEFIQSQGSSLASECSPRRVASPMEGIIEEMQSRIRRLERWLAVNTVLWTFLMSALVGYSLYQRKRQ 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00047 762 CDD UMPK_like 329 497 - -
Pral4512g00047 762 PRINTS Uridine kinase signature 448 458 - -
Pral4512g00047 762 PRINTS Uridine kinase signature 354 365 - -
Pral4512g00047 762 PRINTS Uridine kinase signature 327 344 - -
Pral4512g00047 762 Pfam Phosphoribulokinase / Uridine kinase family 329 494 IPR006083 GO:0005524|GO:0016301
Pral4512g00047 762 Gene3D - 516 674 - -
Pral4512g00047 762 SMART AAA_5 326 477 IPR003593 GO:0016887
Pral4512g00047 762 SUPERFAMILY CYTH-like phosphatases 535 669 IPR033469 -
Pral4512g00047 762 PANTHER URIDINE KINASE 306 492 - -
Pral4512g00047 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 315 497 IPR027417 -
Pral4512g00047 762 Gene3D - 326 503 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00047 Pral-Chr4512 330963 346154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00047 322 461 PRT Gene Family AT1G55810 27.097 4.00e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00047 - - gmx:100778905 1254.97