Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00046 ATGGAGAATTATCGCAATGGCATTGATGAAGGGAATGATTTGGATTCTATAGACTTTGATGCCTTGGTCAAGAATCTTGAGGATTTGACCAAAGGAAATGATACACGGATTCCTGTGTTTGACTATCAACAAAAGAGACATGTTGGATATAAAGCAATAAAGAGTGCTTCGTCAGGGGTGGTAGTAGTTGATGGCACATATGCTCTACATGCAAAACTGCGGTCTTTGCTAGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCGCTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAACCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTCGTTTCATCATTTAGAGAAGCCATCTACAAGGTGAAATGCAGAAGCGAGTCTCCTGATGGACATTTGGGTTCTTCCTTTCAACAAGATGAAGCACAAACAGACAATTGTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGAAGAAGCAACAATCAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGATCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGGGGGCTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAGCGTGCATCTACAACAGTCACTAATGGCAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACGTACATGGTGCTGAGGGGAACAAATAGGAAAACAGTTGGAACAGAAGCATTAAAGATGGGGGTGTGTGGCCCTTGGATCACCAAGTCATACCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTCAGTACACCACCACTTGTGTCTAATACACCTGGGTCTGGTAATCAAGAAAGAGAAATTGTTGCACCAAAGCCAATTCGAGTTACCCCTGACCTTGTAACTGGAATTGAGGAATTGTCGCAGCCATGGACTCGATCCCCGAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTAGCACTGACAACACAGCACTAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGAGTAAAGGATTTTAAATACGATAACTTCAGCTCACTTGATCTGGCTTTGTTATCAAAGAATATTGATGACATACGAAATGTTCGGAGAACAAAAGTTCCTATATTTGACCTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACCTGTGGATTGCTGTGGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGATAAGGGTAGAGTGGGATATTTTATGTCCCAAAATGAGATTATGATGACAGTATTTCCCATGTTCCAGCAGCACATTGAACCACATCTTGTCCATGCACATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAAAGTAATAAAAAGGTTGCTTATCAAGATATTCTTATGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATATATATTTAAAGCTTCCCGGGATCCCCTCTAATGGACAGTTGACCGAGGGTGATTGTATAAGGGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAACCGAAAGTGGATTTTGATATTGGCATTAGTACGGTTGCAGGTCTTCTCAATCTGGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAGGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGTGTTGATAAGGATGCTGTTGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGTGGCATCCACTCTCAGCAATCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTTAGCATCAGAATGCTCACCAAGAAGAGTGGCGTCCCCAATGGAAGGGATTATCGAGGAGATGCAATCCAGGATTAGAAGGCTAGAACGGTGGCTTGCTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTCGTGGGTTATTCACTATATCAAAGGAAGCGTCAATGA 2583 0.4108 MENYRNGIDEGNDLDSIDFDALVKNLEDLTKGNDTRIPVFDYQQKRHVGYKAIKSASSGVVVVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHLGSSFQQDEAQTDNCIEMYLRPPSASEEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVTNGNVSVSFETIDALGETYMVLRGTNRKTVGTEALKMGVCGPWITKSYLEMILERKGVPRLSTPPLVSNTPGSGNQEREIVAPKPIRVTPDLVTGIEELSQPWTRSPRKSKMEPVIATWRFISSDSSSTDNTALDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKGRVGYFMSQNEIMMTVFPMFQQHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILMILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDGSYTTKSYLQIILENLPALERTFGGIHSQQSARMQEIVEFIQSQGSSLASECSPRRVASPMEGIIEEMQSRIRRLERWLAVNTVLWTFLMSALVGYSLYQRKRQ 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00046 860 SMART AAA_5 424 575 IPR003593 GO:0016887
Pral4512g00046 860 Gene3D - 2 150 IPR027417 -
Pral4512g00046 860 Gene3D - 614 772 - -
Pral4512g00046 860 SUPERFAMILY CYTH-like phosphatases 633 767 IPR033469 -
Pral4512g00046 860 CDD UMPK_like 1 134 - -
Pral4512g00046 860 PANTHER URIDINE KINASE 404 590 - -
Pral4512g00046 860 CDD UMPK_like 427 595 - -
Pral4512g00046 860 Gene3D - 424 601 IPR027417 -
Pral4512g00046 860 PRINTS Uridine kinase signature 425 442 - -
Pral4512g00046 860 PRINTS Uridine kinase signature 452 463 - -
Pral4512g00046 860 PRINTS Uridine kinase signature 546 556 - -
Pral4512g00046 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 595 IPR027417 -
Pral4512g00046 860 Pfam Phosphoribulokinase / Uridine kinase family 427 592 IPR006083 GO:0005524|GO:0016301
Pral4512g00046 860 Pfam Phosphoribulokinase / Uridine kinase family 15 131 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00046 Pral-Chr4512 330963 346188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00046 420 559 PRT Gene Family AT1G55810 27.097 6.44e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00046 - - gmx:100778905 1492.63