Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00045 ATGGACGACCAAGTTGTCCAGCGCGTCTTCCATGAAGGAGGCCGCGACTACTATCAACAACAGCCTTCTACATCCTCATCTTCCTCCTCCATCCTTCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTGTTAGTAAAATCTATCCAAGAACTTCGAGAGAAAAAAGAGGGTCTTGTAACAGTTGGCATTGGTGGTCCTAGTGGTTCTGGTAAAACAAGCTTAGCAGAGAAGGTGGCATCTGTTATTGGTTGCACTGTTATATCGATGGAGAATTATCGCAATGGCATTGATGAAGGGAATGATTTGGATTCTATAGACTTTGATGCCTTGGTCAAGAATCTTGAGGATTTGACCAAAGGAAATGATACACGGATTCCTGTGTTTGACTATCAACAAAAGAGACATGTTGGATATAAAGCAATAAAGAGTGCTTCGTCAGGGGTGGTAGTAGTTGATGGCACATATGCTCTACATGCAAAACTGCGGTCTTTGCTAGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCGCTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAACCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTCGTTTCATCATTTAGAGAAGCCATCTACAAGGTGAAATGCAGAAGCGAGTCTCCTGATGGACATTTGGGTTCTTCCTTTCAACAAGATGAAGCACAAACAGACAATTGTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGAAGAAGCAACAATCAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGATCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGGGGGCTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAGCGTGCATCTACAACAGTCACTAATGGCAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACGTACATGGTGCTGAGGGGAACAAATAGGAAAACAGTTGGAACAGAAGCATTAAAGATGGGGGTGTGTGGCCCTTGGATCACCAAGTCATACCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTCAGTACACCACCACTTGTGTCTAATACACCTGGGTCTGGTAATCAAGAAAGAGAAATTGTTGCACCAAAGCCAATTCGAGTTACCCCTGACCTTGTAACTGGAATTGAGGAATTGTCGCAGCCATGGACTCGATCCCCGAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTAGCACTGACAACACAGCACTAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGAGTAAAGGATTTTAAATACGATAACTTCAGCTCACTTGATCTGGCTTTGTTATCAAAGAATATTGATGACATACGAAATGTTCGGAGAACAAAAGTTCCTATATTTGACCTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACCTGTGGATTGCTGTGGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGATAAGGGTAGAGTGGGATATTTTATGTCCCAAAATGAGATTATGATGACAGTATTTCCCATGTTCCAGCAGCACATTGAACCACATCTTGTCCATGCACATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAAAGTAATAAAAAGGTTGCTTATCAAGATATTCTTATGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATATATATTTAAAGCTTCCCGGGATCCCCTCTAATGGACAGTTGACCGAGGGTGATTGTATAAGGGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAACCGAAAGTGGATTTTGATATTGGCATTAGTACGGTTGCAGGTCTTCTCAATCTGGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAGGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGTGTTGATAAGGATGCTGTTGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGTGGCATCCACTCTCAGCAATCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTTAGCATCAGAATGCTCACCAAGAAGAGTGGCGTCCCCAATGGAAGGGATTATCGAGGAGATGCAATCCAGGATTAGAAGGCTAGAACGGTGGCTTGCTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTCGTGGGTTATTCACTATATCAAAGGAAGCGTCAATGA 2859 0.4141 MDDQVVQRVFHEGGRDYYQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRNGIDEGNDLDSIDFDALVKNLEDLTKGNDTRIPVFDYQQKRHVGYKAIKSASSGVVVVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHLGSSFQQDEAQTDNCIEMYLRPPSASEEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVTNGNVSVSFETIDALGETYMVLRGTNRKTVGTEALKMGVCGPWITKSYLEMILERKGVPRLSTPPLVSNTPGSGNQEREIVAPKPIRVTPDLVTGIEELSQPWTRSPRKSKMEPVIATWRFISSDSSSTDNTALDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKGRVGYFMSQNEIMMTVFPMFQQHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILMILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDGSYTTKSYLQIILENLPALERTFGGIHSQQSARMQEIVEFIQSQGSSLASECSPRRVASPMEGIIEEMQSRIRRLERWLAVNTVLWTFLMSALVGYSLYQRKRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00045 952 Gene3D - 706 864 - -
Pral4512g00045 952 PANTHER URIDINE KINASE 496 682 - -
Pral4512g00045 952 Pfam Phosphoribulokinase / Uridine kinase family 65 223 IPR006083 GO:0005524|GO:0016301
Pral4512g00045 952 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Pral4512g00045 952 SMART AAA_5 516 667 IPR003593 GO:0016887
Pral4512g00045 952 SMART AAA_5 61 211 IPR003593 GO:0016887
Pral4512g00045 952 CDD UMPK_like 64 226 - -
Pral4512g00045 952 Gene3D - 516 693 IPR027417 -
Pral4512g00045 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Pral4512g00045 952 CDD UMPK_like 519 687 - -
Pral4512g00045 952 PRINTS Uridine kinase signature 517 534 - -
Pral4512g00045 952 PRINTS Uridine kinase signature 544 555 - -
Pral4512g00045 952 PRINTS Uridine kinase signature 638 648 - -
Pral4512g00045 952 Gene3D - 63 242 IPR027417 -
Pral4512g00045 952 SUPERFAMILY CYTH-like phosphatases 725 859 IPR033469 -
Pral4512g00045 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00045 Pral-Chr4512 330963 346428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00045 512 651 PRT Gene Family AT1G55810 27.097 6.13e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4512g00045 - - gmx:100778905 1647.1