Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4512g00034 ATGTCTGATTCACTCGGTGCATTCAAGCTTCACTCTTACTGCACTCCAAATCCCACCATTATTTCTCCATCATCAGCTCCAGAAATAACTCCAAATAATCCTTATTCTCTCTGTGCCCACTGTTACGTTGGAGAAGAAGCAGGTATTACAAGCAGCTCATCAAGGTGGAGTCCAACACCTGCGCAACTGCTATACCTTGAGCAAGTTTACAGACAAGGAACTAAGACGCCAACGGCTCAACAAATCCAGGTAATAGCTTCGCAGCTACGTCGTTTTGGCAAGATCGAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCAAGAGAGCGCCAGAAACGTCGTCGTTGCGCCGACATGGAAATCTCTCCTCCCCCTTCTTCTCCTTCTGCTCTGCAAGAAAAAGATCATCATATGTGCGCTATGGGATTAACCTCACAAAACCTATCACCCCTACACGTTCTTCAAGGATTGAGAGGGACAAGTTATGAAGTTAAAGAGACAAAGAAGTGGTCATCTTCTTCAAACTGCAGTGCACTTGCAGAGGTCTCTGATCCGCTGAATAGAGCAGAAAGAGGAGCTTATAGAAGGACTCAAAGGGAGGAGAGAGAGACACGGATTTTGAGAATCAAGAGAGAGAAAAGCCAAGAAGCTAAGTGCCAAATTGGAGATATGTCTTGCTTCCTTTCAAATTCCAAGCATCTCATCAAAAGCATTACCACTTCAACTACAACTCATCATACACAAAATTCAAACCCTACAAATTATGATCGTTCTGCTGAAGAAGAAGAAGAAGTTGCAGATGACAGAACCCTTGAGCTGTTTCCTCTTGAGCGATCAGATGAAGATGAGGGCCTTTGTGTCACTGAAAGAAGGAAAGAGAAATTCTGTTCCTTCAATGCTTCCATGGACTCTGAAATCACTTCCAATCAGTTTTTTGAGTTCCTTCCCTTACGAAACTGA 966 0.4369 MSDSLGAFKLHSYCTPNPTIISPSSAPEITPNNPYSLCAHCYVGEEAGITSSSSRWSPTPAQLLYLEQVYRQGTKTPTAQQIQVIASQLRRFGKIEAKNVFYWFQNHKARERQKRRRCADMEISPPPSSPSALQEKDHHMCAMGLTSQNLSPLHVLQGLRGTSYEVKETKKWSSSSNCSALAEVSDPLNRAERGAYRRTQREERETRILRIKREKSQEAKCQIGDMSCFLSNSKHLIKSITTSTTTHHTQNSNPTNYDRSAEEEEEVADDRTLELFPLERSDEDEGLCVTERRKEKFCSFNASMDSEITSNQFFEFLPLRN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4512g00034 321 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 47 316 IPR044555 GO:0003700|GO:0099402
Pral4512g00034 321 MobiDBLite consensus disorder prediction 242 257 - -
Pral4512g00034 321 Gene3D - 50 113 - -
Pral4512g00034 321 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Pral4512g00034 321 SUPERFAMILY Homeodomain-like 52 117 IPR009057 -
Pral4512g00034 321 SMART HOX_1 51 118 IPR001356 GO:0003677
Pral4512g00034 321 CDD homeodomain 55 115 IPR001356 GO:0003677
Pral4512g00034 321 MobiDBLite consensus disorder prediction 115 134 - -
Pral4512g00034 321 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Pral4512g00034 321 MobiDBLite consensus disorder prediction 242 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4512g00034 Pral-Chr4512 289222 291505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4512g00034 53 183 Wox Gene Family AT3G18010 47.328 4.44e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral4512g00034 Homeodomain 2.6e-17 CL0123